RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 OSBPL7Q9BZF2 842 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 CXXC1Q9P0U4 656 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 TUBE1Q9UJT0 475 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 MYH9P35579 1960 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 CAND2O75155 1236 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 PFKMP08237 780 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 IGBP1P78318 339 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 TCTN1Q2MV58 587 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 FAM26DQ5JW98 314 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 NOSTRINQ8IVI9 506 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 TMEM60Q9H2L4 133 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 SAMM50Q9Y512 469 aa17.22■□□□□ 0.35
SNRPA1-213ENST00000560856 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 PARNO95453 639 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 RSPH10BP0C881 870 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 ZNF484Q5JVG2 852 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 FAM109BQ6ICB4 259 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 OTOP2Q7RTS6 562 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 BBXQ8WY36 941 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 PCDHA2Q9Y5H9 948 aa17.21■□□□□ 0.35
SNRPA1-213ENST00000560856 COL1A2P08123 1366 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 CHRNA1P02708 482 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 KLRC1P26715 233 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 MGAT3Q09327 533 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 SLFN12Q8IYM2 578 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 DNAJB3Q8WWF6 145 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
SNRPA1-213ENST00000560856 NEMFO60524 1076 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 C22orf31O95567 290 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 CTSHP09668 335 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 TRAPPC10P48553 1259 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 PRKCEQ02156 737 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 EPHA7Q15375 998 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 TARBP2Q15633 366 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 CALCRLQ16602 461 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 SNX21Q969T3 373 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
SNRPA1-213ENST00000560856 SMIM35A0A1B0GVV1 85 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 BAG4O95429 457 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 OATP04181 439 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 MCM7P33993 719 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 SMAD3P84022 425 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 ZNF174Q15697 407 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 GPR153Q6NV75 609 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 KIAA0319LQ8IZA0 1049 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 NRBP2Q9NSY0 501 aa17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 WRAP73Q9P2S5 460 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-213ENST00000560856 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 GRXCR1A8MXD5 290 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 NBR1Q14596 966 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 CNKSR3Q6P9H4 555 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 EVPLQ92817 2033 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 FAM49AQ9H0Q0 323 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 RGL1Q9NZL6 768 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
SNRPA1-213ENST00000560856 TMEM150BA6NC51 233 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 MARCH6O60337 910 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 RPLP2P05387 115 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 P4HBP07237 508 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 TXKP42681 527 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 QARSP47897 775 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 PSMC5P62195 406 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 MRPS6P82932 125 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 XKR3Q5GH77 459 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 ANO5Q75V66 913 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 HSD17B14Q9BPX1 270 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms