RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
GABPB1-210ENST00000560825 RAD9AQ99638 391 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 IFIH1Q9BYX4 1025 aaKnown RBP12.73□□□□□ -0.37
GABPB1-210ENST00000560825 M0R2N6 131 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
GABPB1-210ENST00000560825 MAFGO15525 162 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 PARNO95453 639 aaKnown RBP12.72□□□□□ -0.37
GABPB1-210ENST00000560825 POU3F3P20264 500 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-210ENST00000560825 CD52P31358 61 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 ZNF76P36508 570 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 STAT5BP51692 787 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 ERVK-21P61565 698 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 UGCGQ16739 394 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TOP1MTQ969P6 601 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 PPP1R16BQ96T49 567 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TPCN1Q9ULQ1 816 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
GABPB1-210ENST00000560825 TMEM150BA6NC51 233 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 CTDNEP1O95476 244 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 GNAT1P11488 350 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 GATMP50440 423 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 MRPS6P82932 125 aaKnown RBP12.71□□□□□ -0.37
GABPB1-210ENST00000560825 SCRN1Q12765 414 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 PRR16Q569H4 304 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 PLPPR4Q7Z2D5 763 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 RPAINQ86UA6 219 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 SEPT8Q92599 483 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 ASB2Q96Q27 587 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 SDF4Q9BRK5 362 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 ZNF577Q9BSK1 485 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 TMX1Q9H3N1 280 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 RC3H2Q9HBD1 1191 aaKnown RBP12.71□□□□□ -0.37
GABPB1-210ENST00000560825 C6orf50Q9HD87 102 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 CYP46A1Q9Y6A2 500 aa12.71□□□□□ -0.37
GABPB1-210ENST00000560825 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 POTEB3A0JP26 581 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 KIF28PB7ZC32 967 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 ENPP3O14638 875 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 MSH4O15457 936 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF862O60290 1169 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 MGEA5O60502 916 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 CAND2O75155 1236 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 TDP2O95551 362 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 AMHP03971 560 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 PSMA5P28066 241 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.38
GABPB1-210ENST00000560825 POTEBQ6S5H4 581 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 MTHFD1LQ6UB35 978 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 NIPA1Q7RTP0 329 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 PDRG1Q9NUG6 133 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 THEGQ9P2T0 379 aa12.71□□□□□ -0.38
GABPB1-210ENST00000560825 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 BMP1P13497 986 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 KLRC1P26715 233 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 CIITAP33076 1130 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 EPC2Q52LR7 807 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 TBCKQ8TEA7 893 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
GABPB1-210ENST00000560825 TGS1Q96RS0 853 aaKnown RBP12.7□□□□□ -0.38
GABPB1-210ENST00000560825 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 AZI2Q9H6S1 392 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 HCSTQ9UBK5 93 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 PCDHA2Q9Y5H9 948 aa12.7□□□□□ -0.38
GABPB1-210ENST00000560825 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 BACH1O14867 736 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 CHMP2AO43633 222 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 C22orf31O95567 290 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 PDXDC2PQ6P474 469 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 ATP8B4Q8TF62 1192 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 GABBR1Q9UBS5 961 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
GABPB1-210ENST00000560825 NOC2LQ9Y3T9 749 aaKnown RBP12.69□□□□□ -0.38
GABPB1-210ENST00000560825 MAFBQ9Y5Q3 323 aaPredicted RBP12.69□□□□□ -0.38
GABPB1-210ENST00000560825 IGSF9BQ9UPX0 1349 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 SLC37A4O43826 429 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 EFCAB14O75071 495 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 CSPG5O95196 566 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 VTNP04004 478 aa12.68□□□□□ -0.38
GABPB1-210ENST00000560825 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms