RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 PTPN5P54829 565 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 ANTXR2P58335 489 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 UBE3AQ05086 875 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 CAMK1Q14012 370 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 PAN2Q504Q3 1202 aaKnown RBP13.79□□□□□ -0.2
MARK3-221ENST00000560603 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
MARK3-221ENST00000560603 TRIM67Q6ZTA4 783 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
MARK3-221ENST00000560603 LINC01599Q8WXQ3 324 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 CELF4Q9BZC1 486 aaKnown RBP13.79□□□□□ -0.2
MARK3-221ENST00000560603 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 SLC9A2Q9UBY0 812 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 PCDHB12Q9Y5F1 795 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 IGSF9BQ9UPX0 1349 aa13.79□□□□□ -0.2
MARK3-221ENST00000560603 ATG2AQ2TAZ0 1938 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 TMEM221A6NGB7 291 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 LOC730098B7Z3J9 87 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 M0R296 226 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 GSPT1P15170 499 aaKnown RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 DNAJB1P25685 340 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 MCM5P33992 734 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 KRT76Q01546 638 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 PLPPR4Q7Z2D5 763 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 MYL10Q9BUA6 226 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 PHF7Q9BWX1 381 aaPredicted RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 TLE6Q9H808 572 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 CLEC1BQ9P126 229 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 PCDHB7Q9Y5E2 793 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 ZFHX2Q9C0A1 2572 aaPredicted RBP13.78□□□□□ -0.2
MARK3-221ENST00000560603 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
MARK3-221ENST00000560603 SMIM35A0A1B0GVV1 85 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 PRC1O43663 620 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 NFASCO94856 1347 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 SLC26A2P50443 739 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 STAT5BP51692 787 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 ZXDAP98168 799 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
MARK3-221ENST00000560603 UBE2SQ16763 222 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
MARK3-221ENST00000560603 ADGRD2Q7Z7M1 963 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
MARK3-221ENST00000560603 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
MARK3-221ENST00000560603 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 C1orf112Q9NSG2 853 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 USP15Q9Y4E8 981 aaPredicted RBP13.77□□□□□ -0.21
MARK3-221ENST00000560603 TAF6LQ9Y6J9 622 aa13.77□□□□□ -0.21
MARK3-221ENST00000560603 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 SGSM2O43147 1006 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 FOSP01100 380 aaPredicted RBP13.76□□□□□ -0.21
MARK3-221ENST00000560603 LIFRP42702 1097 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 ACTR2P61160 394 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 CBX2Q14781 532 aaPredicted RBP13.76□□□□□ -0.21
MARK3-221ENST00000560603 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 ZBTB10Q96DT7 871 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 PCYT2Q99447 389 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 IRF2BPLQ9H1B7 796 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
MARK3-221ENST00000560603 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
MARK3-221ENST00000560603 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
MARK3-221ENST00000560603 GPR182O15218 404 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 HBP1O60381 514 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 RPS6KA5O75582 802 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 ATF7P17544 494 aaPredicted RBP13.75□□□□□ -0.21
MARK3-221ENST00000560603 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
MARK3-221ENST00000560603 SIGLEC14Q08ET2 396 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 FAM160B1Q5W0V3 765 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 FBXL6Q8N531 539 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 RPGRIP1Q96KN7 1286 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 NEK1Q96PY6 1258 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
MARK3-221ENST00000560603 GINS2Q9Y248 185 aa13.75□□□□□ -0.21
MARK3-221ENST00000560603 PTPRZ1P23471 2315 aaPredicted RBP13.74□□□□□ -0.21
MARK3-221ENST00000560603 SH2B2O14492 632 aaPredicted RBP13.74□□□□□ -0.21
MARK3-221ENST00000560603 BACH1O14867 736 aa13.74□□□□□ -0.21
MARK3-221ENST00000560603 FGF18O76093 207 aa13.74□□□□□ -0.21
MARK3-221ENST00000560603 GLP2RO95838 553 aa13.74□□□□□ -0.21
MARK3-221ENST00000560603 KLRC1P26715 233 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms