RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 POF1BQ8WVV4 589 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ZBTB10Q96DT7 871 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 AZI2Q9H6S1 392 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 TRPV2Q9Y5S1 764 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 TECTAO75443 2155 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 ST18O60284 1047 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 ATP9AO75110 1047 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 SCG2P13521 617 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 KIF5BP33176 963 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 P2RX5Q93086 422 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 ZNF689Q96CS4 500 aaPredicted RBP12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 GPRASP2Q96D09 838 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 PHOX2BQ99453 314 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 FTHL17Q9BXU8 183 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 IL25Q9H293 177 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 TLE6Q9H808 572 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 AGO3Q9H9G7 860 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 KMT2EQ8IZD2 1858 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 EVPLQ92817 2033 aa12.03□□□□□ -0.48
CDC42BPB-207ENST00000560492 FNDC1Q4ZHG4 1894 aaPredicted RBP12.02□□□□□ -0.48
CDC42BPB-207ENST00000560492 GSTTP1A0A1W2PQM5 241 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 E7EWF7 191 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 RPLP2P05387 115 aaKnown RBP12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 CYP21A2P08686 494 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 INSRRP14616 1297 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 KCNA2P16389 499 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 DNAJB1P25685 340 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 GATMP50440 423 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 TROAPQ12815 778 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 UBE2SQ16763 222 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 TMEM266Q2M3C6 531 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 CASC1Q6TDU7 716 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 ZNF654Q8IZM8 581 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 EFHBQ8N7U6 833 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PRSS33Q8NF86 280 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 TRAPPC12Q8WVT3 735 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 RC3H2Q9HBD1 1191 aaKnown RBP12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHB7Q9Y5E2 793 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 PCDHGC5Q9Y5F6 944 aa12.02□□□□□ -0.49
CDC42BPB-207ENST00000560492 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 MEIS2O14770 477 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 PER2O15055 1255 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 IGHDP01880 384 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SRGAP2BP0DMP2 458 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 ZXDAP98168 799 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 PTH1RQ03431 593 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 MSLNLQ96KJ4 702 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 PRRX2Q99811 253 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SDF4Q9BRK5 362 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SPZ1Q9BXG8 430 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 FAM86C1Q9NVL1 165 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 CLEC1BQ9P126 229 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 SLC9A2Q9UBY0 812 aa12.01□□□□□ -0.49
CDC42BPB-207ENST00000560492 hCG_1642624A0A1W2PR95 340 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 MBLAC1A4D2B0 266 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-207ENST00000560492 TBKBP1A7MCY6 615 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 PIK3CDO00329 1044 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 DDAH1O94760 285 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 PLEKHA8P1O95397 391 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 EYA4O95677 639 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 ITGB5P18084 799 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 RXRAP19793 462 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 CA8P35219 290 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 GNAQP50148 359 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 KRT76Q01546 638 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 AAMPQ13685 434 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 CAMK1Q14012 370 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 PKN1Q16512 942 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 MARCH8Q5T0T0 291 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 HEATR3Q7Z4Q2 680 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
CDC42BPB-207ENST00000560492 CMTR1Q8N1G2 835 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms