RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SHROOM1Q2M3G4 852 aaPredicted RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 FAM83BQ5T0W9 1011 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 C10orf76Q5T2E6 689 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 OTOP1Q7RTM1 612 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 CACNA2D4Q7Z3S7 1137 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 BAP1Q92560 729 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 HPS3Q969F9 1004 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 P2RX7Q99572 595 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 HSD17B14Q9BPX1 270 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 EIF2AK1Q9BQI3 630 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 MMRN2Q9H8L6 949 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 ARFGAP3Q9NP61 516 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.7□□□□□ -0.7
RTF1-206ENST00000560447 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 BZW2Q9Y6E2 419 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 V9GYY5 206 aaPredicted RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 LTBP3Q9NS15 1303 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 MEIS1O00470 390 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 SERPING1P05155 500 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 ICAM1P05362 532 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 SLURP2P0DP57 97 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 MAPTP10636 758 aaKnown RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 ZNF280AP59817 542 aaPredicted RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 ADAM9Q13443 819 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 ALCAMQ13740 583 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 SLC9C1Q4G0N8 1177 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 TEX35Q5T0J7 233 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 LRCH2Q5VUJ6 765 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 CIAPIN1Q6FI81 312 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 B3GNT9Q6UX72 402 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 ZNF572Q7Z3I7 529 aaPredicted RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 LRRN4CLQ8ND94 238 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 TMEM174Q8WUU8 243 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
RTF1-206ENST00000560447 HOOK2Q96ED9 719 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 REEP2Q9BRK0 252 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 TIPINQ9BVW5 301 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 TEKT3Q9BXF9 490 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 KIAA1683Q9H0B3 1180 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 DEF6Q9H4E7 631 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 AIPL1Q9NZN9 384 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 PIM2Q9P1W9 311 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 GUCA1BQ9UMX6 200 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 JRKLQ9Y4A0 524 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 SAR1BQ9Y6B6 198 aa10.69□□□□□ -0.7
RTF1-206ENST00000560447 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 BTNL10A8MVZ5 291 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 AKR1B10O60218 316 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 GAS7O60861 476 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 RAD17O75943 681 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 GFPT2O94808 682 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 CFBP00751 764 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 EPB41P11171 864 aaKnown RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 DPEP1P16444 411 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 STAT3P40763 770 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 EPS15P42566 896 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ECE1P42892 770 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 KIF11P52732 1056 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ZNF131P52739 623 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 SNRPFP62306 86 aaKnown RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 KCNMA1Q12791 1236 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 LRRC41Q15345 812 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ASTE1Q2TB18 679 aaPredicted RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 SFMBT2Q5VUG0 894 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 WDR93Q6P2C0 686 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 XRRA1Q6P2D8 792 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 LDHDQ86WU2 507 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 PRPF38AQ8NAV1 312 aaKnown RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 VTI1AQ96AJ9 217 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ALS2CR12Q96Q35 445 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 MXRA8Q9BRK3 442 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ARHGAP20Q9P2F6 1191 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 RNF14Q9UBS8 474 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 ARMCX3Q9UH62 379 aaPredicted RBP10.68□□□□□ -0.7
RTF1-206ENST00000560447 SMCHD1A6NHR9 2005 aa10.68□□□□□ -0.7
RTF1-206ENST00000560447 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 CTNND1O60716 968 aaKnown RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 SLITRK3O94933 977 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 FAM13AO94988 1023 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 LYPLA2O95372 231 aa10.67□□□□□ -0.7
RTF1-206ENST00000560447 AFPP02771 609 aaKnown RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 PNMA6AP0CW24 399 aaPredicted RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 TCP1P17987 556 aaKnown RBP10.67□□□□□ -0.7
RTF1-206ENST00000560447 NR2F2P24468 414 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms