RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FBXO2Q9UK22 296 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 ODF2LQ9ULJ1 636 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 KCNH4Q9UQ05 1017 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 EFR3BQ9Y2G0 817 aa6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 SRPRBQ9Y5M8 271 aaKnown RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 EPN1Q9Y6I3 576 aaPredicted RBP6.6□□□□□ -1.35
SNRPA1-209ENST00000560307 NUP188Q5SRE5 1749 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 KLHL33A6NCF5 533 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 HMGB1P1B2RPK0 211 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 TEX33O43247 280 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 MMP20O60882 483 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 EGFRP00533 1210 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 TCP1P17987 556 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 MARCKSP29966 332 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 CASP14P31944 242 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 EIF4A3P38919 411 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 FXR1P51114 621 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 CDK17Q00537 523 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 GCKRQ14397 625 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 SNCBQ16143 134 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 MEA1Q16626 185 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 CCDC40Q4G0X9 1142 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 SLC9C2Q5TAH2 1124 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 NCAPH2Q6IBW4 605 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 TLDC1Q6P9B6 456 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 C6orf89Q6UWU4 347 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 LRIG3Q6UXM1 1119 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 RALYLQ86SE5 291 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 ANKRD13AQ8IZ07 590 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 GLIS3Q8NEA6 775 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 ACRBPQ8NEB7 543 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 ZNF473Q8WTR7 871 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 NOC3LQ8WTT2 800 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 N4BP2L2Q92802 583 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 TRIM11Q96F44 468 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 SGSM3Q96HU1 749 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 FAXDC2Q96IV6 333 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 MMS19Q96T76 1030 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 MTA3Q9BTC8 594 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 METTL22Q9BUU2 404 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 NUP58Q9BVL2 599 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 HOMER3Q9NSC5 361 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 SAMSN1Q9NSI8 373 aaKnown RBP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 RWDD2AQ9UIY3 292 aa6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNRPA1-209ENST00000560307 PKD1L3Q7Z443 1732 aa6.59□□□□□ -1.36
SNRPA1-209ENST00000560307 RREB1Q92766 1687 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 TMEM2Q9UHN6 1383 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 DCDC2BA2VCK2 349 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 C5orf60A6NFR6 353 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 ANKRD65E5RJM6 399 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 PES1O00541 588 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 C2CD2LO14523 706 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 LIN7AO14910 233 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 KHNYNO15037 678 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 RNMTO43148 476 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 RTN2O75298 545 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 DNAJC8O75937 253 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 FAM107AO95990 144 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 IGKV5-2P06315 115 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 GSTA1P08263 222 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 METAP2P50579 478 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 VAV2P52735 878 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 COPB1P53618 953 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 TFCP2Q12800 502 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 SFSWAPQ12872 951 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 GRIK3Q13003 919 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CCINQ13939 588 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 PTGISQ16647 500 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CWF19L2Q2TBE0 894 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 FIGNQ5HY92 759 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 PEAR1Q5VY43 1037 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 NAA35Q5VZE5 725 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CRELD2Q6UXH1 353 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 KIAA1328Q86T90 577 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 SGMS1Q86VZ5 419 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 NOSTRINQ8IVI9 506 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 APLFQ8IW19 511 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC13Q8IYE1 715 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 TRIM58Q8NG06 486 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 OR8K1Q8NGG5 319 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CAGE1Q8TC20 777 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF296Q8WUU4 475 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 JAKMIP2Q96AA8 810 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 EDC3Q96F86 508 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 SEC16BQ96JE7 1060 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 ANKRD27Q96NW4 1050 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 MED15Q96RN5 788 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 DBNDD2Q9BQY9 259 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 JPH2Q9BR39 696 aaPredicted RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 MOV10L1Q9BXT6 1211 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 TRIM55Q9BYV6 548 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms