RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 EEF2KMTQ96G04 330 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 NACC1Q96RE7 527 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 RIT2Q99578 217 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 WDR18Q9BV38 432 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 TEKT3Q9BXF9 490 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 FUT8Q9BYC5 575 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 TBC1D7Q9P0N9 293 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 LOC285556D6RIA3 1793 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 COL11A1P12107 1806 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 PHIPQ8WWQ0 1821 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 ASTN1O14525 1302 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 EML1O00423 815 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 GAS7O60861 476 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 EIF3JO75822 258 aaKnown RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 GFPT2O94808 682 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 SEC31AO94979 1220 aaKnown RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 FAM13AO94988 1023 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 CFBP00751 764 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 ICAM1P05362 532 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 PLEKP08567 350 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 EPB41P11171 864 aaKnown RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 KCNA3P22001 575 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 RPS12P25398 132 aaKnown RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 PRKCIP41743 596 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 KCNH2Q12809 1159 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 GPS2Q13227 327 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 ALCAMQ13740 583 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 TNFAIP1Q13829 316 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 MYBPC2Q14324 1141 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 TNIP1Q15025 636 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 TDRD12Q587J7 1177 aaKnown RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 BEND6Q5SZJ8 279 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 C1orf186Q6ZWK4 172 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 HDXQ7Z353 690 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 LDHDQ86WU2 507 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 MCF2L2Q86YR7 1114 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 FMNL3Q8IVF7 1028 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 SPICE1Q8N0Z3 855 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 SMCR8Q8TEV9 937 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-212ENST00000559937 LPAR1Q92633 364 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 DYDC2Q96IM9 177 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 MXRA8Q9BRK3 442 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 RUSC1Q9BVN2 902 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 KIAA1683Q9H0B3 1180 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 BHMT2Q9H2M3 363 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 ACBD3Q9H3P7 528 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 RNF14Q9UBS8 474 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 SNX12Q9UMY4 172 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 HYOU1Q9Y4L1 999 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 RLFQ13129 1914 aa8.89□□□□□ -0.99
SMAD3-212ENST00000559937 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 SHTN1A0MZ66 631 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 SLITRK3O94933 977 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 GCNT3O95395 438 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 NR3C1P04150 777 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 MYBP10242 640 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 XRCC5P13010 732 aaKnown RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 DPEP1P16444 411 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 GUCY2CP25092 1073 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 HOXD13P35453 343 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 CASP5P51878 434 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 POLR2FP61218 127 aaKnown RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 CYP27A1Q02318 531 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 CACNB1Q02641 598 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 KLHL30Q0D2K2 578 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 TERF2Q15554 542 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ASIC2Q16515 512 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 CIAPIN1Q6FI81 312 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 CCDC70Q6NSX1 233 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 GBP6Q6ZN66 633 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 MMGT1Q8N4V1 131 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 PRPF38AQ8NAV1 312 aaKnown RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 GOLGA5Q8TBA6 731 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 NOX5Q96PH1 765 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 PNKPQ96T60 521 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF577Q9BSK1 485 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 TIPINQ9BVW5 301 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 MAF1Q9H063 256 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 EPC1Q9H2F5 836 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ZHX3Q9H4I2 956 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ZSWIM4Q9H7M6 989 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 VIPAS39Q9H9C1 493 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 PARVGQ9HBI0 331 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 VEZTQ9HBM0 779 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF277Q9NRM2 450 aaPredicted RBP8.88□□□□□ -0.99
SMAD3-212ENST00000559937 L1RE1Q9UN81 338 aa8.88□□□□□ -0.99
SMAD3-212ENST00000559937 ZMYM2Q9UBW7 1377 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 MACROD2A1Z1Q3 448 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 TLR2O60603 784 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 SASH3O75995 380 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 LYPLA2O95372 231 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 RHOXF2BP0C7M4 288 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 PSMC2P35998 433 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms