RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MAFBQ9Y5Q3 323 aaPredicted RBP13.58□□□□□ -0.23
HERC1-205ENST00000559886 BACH1O14867 736 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 GNRH1P01148 92 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 SMPD1P17405 629 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
HERC1-205ENST00000559886 TCF7P36402 384 aaPredicted RBP13.58□□□□□ -0.24
HERC1-205ENST00000559886 ASIC1P78348 528 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 MAP2K1Q02750 393 aaPredicted RBP13.58□□□□□ -0.24
HERC1-205ENST00000559886 DPCR1Q3MIW9 517 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
HERC1-205ENST00000559886 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
HERC1-205ENST00000559886 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 SRRDQ9UH36 339 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 MYH11P35749 1972 aa13.58□□□□□ -0.24
HERC1-205ENST00000559886 PVALEFA0A1B0GWK0 134 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 FSD2A1L4K1 749 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 NOP56O00567 594 aaKnown RBP13.57□□□□□ -0.24
HERC1-205ENST00000559886 FKTNO75072 461 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 STBD1O95210 358 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 CAVIN2O95810 425 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 PTGS1P23219 599 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 HOXD10P28358 340 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
HERC1-205ENST00000559886 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 TRIB2Q92519 343 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 ERO1AQ96HE7 468 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 PCYT2Q99447 389 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 ANKEF1Q9NU02 776 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 ADCY6O43306 1168 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 LGR5O75473 907 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 RHOBTB3O94955 611 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 RARRES1P49788 294 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 TNFAIP2Q03169 654 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 KMT5BQ4FZB7 885 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 RINT1Q6NUQ1 792 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 C1orf186Q6ZWK4 172 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 UNC13DQ70J99 1090 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 ANO5Q75V66 913 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
HERC1-205ENST00000559886 PRKCEQ02156 737 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 MFSD14CQ5VZR4 134 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 FAM160B1Q5W0V3 765 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 C11orf57Q6ZUT1 292 aaPredicted RBP13.56□□□□□ -0.24
HERC1-205ENST00000559886 PPTC7Q8NI37 304 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 ZNF296Q8WUU4 475 aaPredicted RBP13.56□□□□□ -0.24
HERC1-205ENST00000559886 RUSC1Q9BVN2 902 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 RBSNQ9H1K0 784 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 ARHGEF35A5YM69 484 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 ATP4AP20648 1035 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 STAT5BP51692 787 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 XKR3Q5GH77 459 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 OTUD6AQ7L8S5 288 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 MLKLQ8NB16 471 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
HERC1-205ENST00000559886 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
HERC1-205ENST00000559886 EMSYQ7Z589 1322 aa13.56□□□□□ -0.24
HERC1-205ENST00000559886 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 GIT2Q14161 759 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
HERC1-205ENST00000559886 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
HERC1-205ENST00000559886 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 AZI2Q9H6S1 392 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 TMEM150BA6NC51 233 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
HERC1-205ENST00000559886 CYBAP13498 195 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 IDEP14735 1019 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 ZNF165P49910 485 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 EHHADHQ08426 723 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 PADI6Q6TGC4 694 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 OR6J1Q8NGC5 347 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 NAT10Q9H0A0 1025 aaKnown RBP13.55□□□□□ -0.24
HERC1-205ENST00000559886 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
HERC1-205ENST00000559886 OATP04181 439 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 GUCY2CP25092 1073 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 RAD51AP2Q09MP3 1159 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 XKR9Q5GH70 373 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 CCDC43Q96MW1 224 aaKnown RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
HERC1-205ENST00000559886 PANK4Q9NVE7 773 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 Q9Y3F1 56 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 CENPFP49454 3210 aa13.54□□□□□ -0.24
HERC1-205ENST00000559886 PPFIA4O75335 1185 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms