RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ATG7O95352 703 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 SCG2P13521 617 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 ADCY7P51828 1080 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 PAK2Q13177 524 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 ADAM15Q13444 863 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 SMAD4Q13485 552 aaKnown RBP10.46□□□□□ -0.73
HDDC3-204ENST00000559834 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 FAM160B1Q5W0V3 765 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 RTN4RL1Q86UN2 441 aaPredicted RBP10.46□□□□□ -0.73
HDDC3-204ENST00000559834 RAB11FIP4Q86YS3 637 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 ZNF713Q8N859 430 aaPredicted RBP10.46□□□□□ -0.73
HDDC3-204ENST00000559834 SPPL3Q8TCT6 385 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 KCNH6Q9H252 994 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 ANO2Q9NQ90 1003 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 AAASQ9NRG9 546 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 CD207Q9UJ71 328 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 PCDHB7Q9Y5E2 793 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 V9GY48 417 aaPredicted RBP10.46□□□□□ -0.73
HDDC3-204ENST00000559834 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 KDM3AQ9Y4C1 1321 aa10.46□□□□□ -0.73
HDDC3-204ENST00000559834 TTC3P53804 2025 aa10.46□□□□□ -0.74
HDDC3-204ENST00000559834 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 MEIS1O00470 390 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 BACH1O14867 736 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 GPR182O15218 404 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 MBTPS2O43462 519 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 ITGB1P05556 798 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 ARP10275 920 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 KLRC1P26715 233 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 NDUFV1P49821 464 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 TMEM62Q0P6H9 643 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 NFX1Q12986 1120 aaKnown RBP10.45□□□□□ -0.74
HDDC3-204ENST00000559834 AP3B2Q13367 1082 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 CLUL1Q15846 466 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 RTN1Q16799 776 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 WWC2Q6AWC2 1192 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 NIPA1Q7RTP0 329 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 KLHL23Q8NBE8 558 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 CYP2W1Q8TAV3 490 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 MICAL1Q8TDZ2 1067 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 NEK1Q96PY6 1258 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 LRRC2Q9BYS8 371 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 ANO3Q9BYT9 981 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 AGO4Q9HCK5 861 aaKnown RBP10.45□□□□□ -0.74
HDDC3-204ENST00000559834 C1orf112Q9NSG2 853 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 PCDHB12Q9Y5F1 795 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 MRPL42Q9Y6G3 142 aaKnown RBP10.45□□□□□ -0.74
HDDC3-204ENST00000559834 TRANK1O15050 2925 aa10.45□□□□□ -0.74
HDDC3-204ENST00000559834 DOCK5Q9H7D0 1870 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 DENND3A2RUS2 1198 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 STXBP3O00186 592 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 ZBTB43O43298 467 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 RPS6KA5O75582 802 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 IRS1P35568 1242 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 SREBF1P36956 1147 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 SARSP49591 514 aaKnown RBP10.44□□□□□ -0.74
HDDC3-204ENST00000559834 DLX2Q07687 328 aaPredicted RBP10.44□□□□□ -0.74
HDDC3-204ENST00000559834 CAMK1Q14012 370 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 PAN2Q504Q3 1202 aaKnown RBP10.44□□□□□ -0.74
HDDC3-204ENST00000559834 ZNF484Q5JVG2 852 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 SPOUT1Q5T280 376 aaKnown RBP10.44□□□□□ -0.74
HDDC3-204ENST00000559834 MCTP2Q6DN12 878 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 MIS18BP1Q6P0N0 1132 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
HDDC3-204ENST00000559834 EFHBQ8N7U6 833 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 ATP8B4Q8TF62 1192 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 POF1BQ8WVV4 589 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 LINC01599Q8WXQ3 324 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 GINS2Q9Y248 185 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
HDDC3-204ENST00000559834 COL1A2P08123 1366 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 IGKV6D-21A0A0A0MT36 114 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 CCDC196A0A1B0GTZ2 297 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 CSPG5O95196 566 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 EYA4O95677 639 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 HMGB1P09429 215 aaKnown RBP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 GTF2F1P35269 517 aaKnown RBP eCLIP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 FGD1P98174 961 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 EXOSC10Q01780 885 aaKnown RBP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 UBE3AQ05086 875 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 ITGB3BPQ13352 177 aaPredicted RBP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 KRT32Q14532 448 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 HERC4Q5GLZ8 1057 aaPredicted RBP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
HDDC3-204ENST00000559834 SWSAP1Q6NVH7 229 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 PDXDC2PQ6P474 469 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 ABHD15Q6UXT9 468 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 SLC24A5Q71RS6 500 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 RNF135Q8IUD6 432 aa10.43□□□□□ -0.74
HDDC3-204ENST00000559834 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms