RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 FTHL17Q9BXU8 183 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 RWDD3Q9Y3V2 267 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 MYH7BA7E2Y1 1941 aa16.99■□□□□ 0.31
LRRC28-213ENST00000559399 IGLV3-22A0A075B6J6 115 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 C5orf67F2Z3F1 127 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 IPO5O00410 1097 aaKnown RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 PRPF3O43395 683 aaKnown RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 REC8O95072 547 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 CYP3A4P08684 503 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 GNA11P29992 359 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 PAK2Q13177 524 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 PKN1Q16512 942 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 LEXMQ3ZCV2 418 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 MIS18BP1Q6P0N0 1132 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 MTHFD1LQ6UB35 978 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 ABHD15Q6UXT9 468 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 NME8Q8N427 588 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 ATP8B4Q8TF62 1192 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 LINC01599Q8WXQ3 324 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 ZNF577Q9BSK1 485 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 CELF4Q9BZC1 486 aaKnown RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 RC3H2Q9HBD1 1191 aaKnown RBP16.98■□□□□ 0.31
LRRC28-213ENST00000559399 MYO9BQ13459 2157 aa16.98■□□□□ 0.31
LRRC28-213ENST00000559399 IGSF9BQ9UPX0 1349 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 DHX15O43143 795 aaKnown RBP16.97■□□□□ 0.31
LRRC28-213ENST00000559399 HBP1O60381 514 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 RB1P06400 928 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 PSMA5P28066 241 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 KRT76Q01546 638 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 BTG3Q14201 252 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-213ENST00000559399 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 CCDC60Q8IWA6 550 aaPredicted RBP16.97■□□□□ 0.31
LRRC28-213ENST00000559399 PHKBQ93100 1093 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 C1QTNF1Q9BXJ1 281 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 AGXT2Q9BYV1 514 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 NSUN3Q9H649 340 aaKnown RBP16.97■□□□□ 0.31
LRRC28-213ENST00000559399 ZNF302Q9NR11 478 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
LRRC28-213ENST00000559399 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 DGKIO75912 1065 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 COL9A1P20849 921 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 KLRC1P26715 233 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 BMPR1AP36894 532 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 TCEAL5Q5H9L2 206 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 NPAS4Q8IUM7 802 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 CCDC148Q8NFR7 591 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 BICD2Q8TD16 824 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 CLP1Q92989 425 aaKnown RBP16.96■□□□□ 0.31
LRRC28-213ENST00000559399 ZNF689Q96CS4 500 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-213ENST00000559399 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
LRRC28-213ENST00000559399 LMAN2LQ9H0V9 348 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 PADI3Q9ULW8 664 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 COL1A2P08123 1366 aa16.96■□□□□ 0.31
LRRC28-213ENST00000559399 ZNF484Q5JVG2 852 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 ZNF746Q6NUN9 644 aaPredicted RBP16.95■□□□□ 0.3
LRRC28-213ENST00000559399 SWSAP1Q6NVH7 229 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 CKAP2LQ8IYA6 745 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 SMAP1Q8IYB5 467 aaPredicted RBP16.95■□□□□ 0.3
LRRC28-213ENST00000559399 PABPC5Q96DU9 382 aaKnown RBP16.95■□□□□ 0.3
LRRC28-213ENST00000559399 UIMC1Q96RL1 719 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 SLC26A6Q9BXS9 759 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 GINS2Q9Y248 185 aa16.95■□□□□ 0.3
LRRC28-213ENST00000559399 MICAL3Q7RTP6 2002 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 IFNAR1P17181 557 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 CIITAP33076 1130 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 NTRK3Q16288 839 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 PUS10Q3MIT2 529 aaKnown RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 PRR16Q569H4 304 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 FAM43BQ6ZT52 329 aaPredicted RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 RTN4RL1Q86UN2 441 aaPredicted RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 CMTR2Q8IYT2 770 aaKnown RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 CRIPAKQ8N1N5 446 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 PLVAPQ9BX97 442 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 MAFBQ9Y5Q3 323 aaPredicted RBP16.94■□□□□ 0.3
LRRC28-213ENST00000559399 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
LRRC28-213ENST00000559399 SIP14410 1827 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 ZBTB42B2RXF5 422 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 GRM6O15303 877 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 PSAPP07602 524 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 PDIA3P30101 505 aaKnown RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 EVCP57679 992 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 NFX1Q12986 1120 aaKnown RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 COL19A1Q14993 1142 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 TMEM266Q2M3C6 531 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
LRRC28-213ENST00000559399 KIAA0319LQ8IZA0 1049 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 NEK9Q8TD19 979 aa16.93■□□□□ 0.3
LRRC28-213ENST00000559399 BBXQ8WY36 941 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms