RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TMEM266Q2M3C6 531 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 MTHFD1LQ6UB35 978 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 TSHZ1Q6ZSZ6 1077 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 EP400NLQ6ZTU2 488 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 RTN4RL1Q86UN2 441 aaPredicted RBP23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 CCDC60Q8IWA6 550 aaPredicted RBP23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 FIBCD1Q8N539 461 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 MRPL38Q96DV4 380 aaKnown RBP23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 PPP1R16BQ96T49 567 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 UBE2ZQ9H832 354 aaPredicted RBP23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 GINS2Q9Y248 185 aa23.33■■□□□ 1.33
TSPAN3-206ENST00000559373 IGLV3-22A0A075B6J6 115 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 H3BNC9 293 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 ATG7O95352 703 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 ABHD15Q6UXT9 468 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 PLPPR4Q7Z2D5 763 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 PCDHA2Q9Y5H9 948 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 TRPV2Q9Y5S1 764 aa23.32■■□□□ 1.32
TSPAN3-206ENST00000559373 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 DHX15O43143 795 aaKnown RBP23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 PRPF3O43395 683 aaKnown RBP23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 COL9A1P20849 921 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 KLRC1P26715 233 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 IER5Q5VY09 327 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 SWSAP1Q6NVH7 229 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 ZNF577Q9BSK1 485 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 SLC26A6Q9BXS9 759 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 ZMYND12Q9H0C1 365 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 CDHR5Q9HBB8 845 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 PADI3Q9ULW8 664 aa23.31■■□□□ 1.32
TSPAN3-206ENST00000559373 IGKV6D-21A0A0A0MT36 114 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 M0QZ92 97 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 IPO5O00410 1097 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 ATP4AP20648 1035 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 RCAN1P53805 252 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 NTRK3Q16288 839 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 PAN2Q504Q3 1202 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 TCEAL5Q5H9L2 206 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 PDXDC2PQ6P474 469 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 BANK1Q8NDB2 785 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 KHSRPQ92945 711 aaKnown RBP eCLIP23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 SAMD11Q96NU1 681 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 CELF4Q9BZC1 486 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 GLT8D2Q9H1C3 349 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 EPHX3Q9H6B9 360 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 C6orf50Q9HD87 102 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 ZNF302Q9NR11 478 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 VPS54Q9P1Q0 977 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 ADGRA3Q8IWK6 1321 aa23.3■■□□□ 1.32
TSPAN3-206ENST00000559373 H3BQ06 376 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 LINC00271P0C7V0 271 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 GATMP50440 423 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 BTG3Q14201 252 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 PTPROQ16827 1216 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 PRR16Q569H4 304 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 NIPA1Q7RTP0 329 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 REXO1Q8N1G1 1221 aaKnown RBP23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 CRYGNQ8WXF5 182 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 CD320Q9NPF0 282 aa23.29■■□□□ 1.32
TSPAN3-206ENST00000559373 GRM6O15303 877 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 CYP3A4P08684 503 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 KRT76Q01546 638 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 AKAP17AQ02040 695 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 NFX1Q12986 1120 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 PAK2Q13177 524 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 FAM160B1Q5W0V3 765 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 CKAP2LQ8IYA6 745 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 ZNF689Q96CS4 500 aaPredicted RBP23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 TMX1Q9H3N1 280 aa23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 RC3H2Q9HBD1 1191 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-206ENST00000559373 SMIM35A0A1B0GVV1 85 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 ESYT2A0FGR8 921 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 HBP1O60381 514 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 DTNBO60941 627 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 DGKIO75912 1065 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 IL9P15248 144 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 PDIA3P30101 505 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 BMPR1AP36894 532 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 MIS18BP1Q6P0N0 1132 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 ATP8B4Q8TF62 1192 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 TNPO1Q92973 898 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 GJA10Q969M2 543 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 ALG13Q9NP73 1137 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 IGSF9BQ9UPX0 1349 aa23.27■■□□□ 1.32
TSPAN3-206ENST00000559373 NID2Q14112 1375 aa23.27■■□□□ 1.31
TSPAN3-206ENST00000559373 ZBTB42B2RXF5 422 aa23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 EDIL3O43854 480 aa23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 TOB2Q14106 344 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 KIAA0319LQ8IZA0 1049 aa23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 TMEM40Q8WWA1 233 aa23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 MRPL42Q9Y6G3 142 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-206ENST00000559373 MGEA5O60502 916 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 REC8O95072 547 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 PSMA5P28066 241 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 GNA11P29992 359 aa23.25■■□□□ 1.31
TSPAN3-206ENST00000559373 STK3Q13188 491 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms