RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 FAM160B1Q5W0V3 765 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 MIS18BP1Q6P0N0 1132 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 TRAPPC12Q8WVT3 735 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 WASF1Q92558 559 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 MBOAT7Q96N66 472 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 OSBPL7Q9BZF2 842 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 ZNF302Q9NR11 478 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 TCEAL9Q9UHQ7 104 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 COL1A2P08123 1366 aa12.4□□□□□ -0.42
SPG11-216ENST00000559347 CYP3A7-CYP3A51PA0A087WV96 503 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 ABHD14A-ACY1A0A1B0GW23 586 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 JAK2O60674 1132 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 EFCAB14O75071 495 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 MYOGP15173 224 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 FOSL2P15408 326 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 CYP3A7P24462 503 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
SPG11-216ENST00000559347 LRCH2Q5VUJ6 765 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 PPP2R2DQ66LE6 453 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 ATP8B4Q8TF62 1192 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
SPG11-216ENST00000559347 RIT2Q99578 217 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 MAFBQ9Y5Q3 323 aaPredicted RBP12.39□□□□□ -0.43
SPG11-216ENST00000559347 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 ATG2AQ2TAZ0 1938 aa12.39□□□□□ -0.43
SPG11-216ENST00000559347 CCDC194A0A1B0GVG4 234 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 WDR64B1ANS9 1081 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 SLC37A4O43826 429 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 HBP1O60381 514 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 GAS7O60861 476 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 PSMD10O75832 226 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 CHRNA1P02708 482 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
SPG11-216ENST00000559347 CA3P07451 260 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 PSAPP07602 524 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 ATP4AP20648 1035 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 IKBKEQ14164 716 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
SPG11-216ENST00000559347 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 GJA10Q969M2 543 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 TEKT3Q9BXF9 490 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 FAM49AQ9H0Q0 323 aaPredicted RBP12.38□□□□□ -0.43
SPG11-216ENST00000559347 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 XIRP2A4UGR9 3374 aa12.38□□□□□ -0.43
SPG11-216ENST00000559347 SMIM35A0A1B0GVV1 85 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 ZBTB42B2RXF5 422 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 CHMP2AO43633 222 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 GJB5O95377 273 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 GHRP10912 638 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 SFNP31947 248 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 KRT2P35908 639 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 JAK3P52333 1124 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 MRPS6P82932 125 aaKnown RBP12.37□□□□□ -0.43
SPG11-216ENST00000559347 NR5A1Q13285 461 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 UGCGQ16739 394 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 EARS2Q5JPH6 523 aaKnown RBP12.37□□□□□ -0.43
SPG11-216ENST00000559347 MTHFD1LQ6UB35 978 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 B3GNT9Q6UX72 402 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 PIK3AP1Q6ZUJ8 805 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
SPG11-216ENST00000559347 SEPT8Q92599 483 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 APBB2Q92870 758 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 IFIH1Q9BYX4 1025 aaKnown RBP12.37□□□□□ -0.43
SPG11-216ENST00000559347 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 DISC1Q9NRI5 854 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 GABBR1Q9UBS5 961 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
SPG11-216ENST00000559347 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 SAMM50Q9Y512 469 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
SPG11-216ENST00000559347 VCANP13611 3396 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 TLL1O43897 1013 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 ZNF862O60290 1169 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 MMP1P03956 469 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 GCFC2P16383 781 aaKnown RBP12.36□□□□□ -0.43
SPG11-216ENST00000559347 FOSBP53539 338 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 PRKCEQ02156 737 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 LPIN1Q14693 890 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
SPG11-216ENST00000559347 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms