RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MDM1Q8TC05 714 aa7.7□□□□□ -1.18
USP3-210ENST00000559192 USP6NLQ92738 828 aa7.7□□□□□ -1.18
USP3-210ENST00000559192 METTL14Q9HCE5 456 aaKnown RBP7.7□□□□□ -1.18
USP3-210ENST00000559192 DCP1AQ9NPI6 582 aaPredicted RBP7.7□□□□□ -1.18
USP3-210ENST00000559192 LARSQ9P2J5 1176 aaKnown RBP7.7□□□□□ -1.18
USP3-210ENST00000559192 PNMA2Q9UL42 364 aa7.7□□□□□ -1.18
USP3-210ENST00000559192 PNPLA7Q6ZV29 1317 aa7.7□□□□□ -1.18
USP3-210ENST00000559192 CNTNAP5Q8WYK1 1306 aa7.7□□□□□ -1.18
USP3-210ENST00000559192 ZSCAN5CA6NGD5 496 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 CREB3O43889 395 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 PDHA1P08559 390 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 SGO2Q562F6 1265 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 CFAP157Q5JU67 520 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 NT5DC1Q5TFE4 455 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 KDM7AQ6ZMT4 941 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 GIMAP8Q8ND71 665 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 LRRC8CQ8TDW0 803 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 CELF4Q9BZC1 486 aaKnown RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 GGA1Q9UJY5 639 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 INTUQ9ULD6 942 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 WDR17Q8IZU2 1322 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 ADCY2Q08462 1091 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 MKRN4PQ13434 485 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 KCTD19Q17RG1 926 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 WDR44Q5JSH3 913 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 MFSD14BQ5SR56 506 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 FAM47EQ6ZV65 393 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 TMEM47Q9BQJ4 181 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 UBE2TQ9NPD8 197 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 BARHL2Q9NY43 387 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 PPP1R9AQ9ULJ8 1098 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 RTCBQ9Y3I0 505 aaKnown RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 BAG2O95816 211 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 ATF7P17544 494 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 PSMC2P35998 433 aaKnown RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 STAT3P40763 770 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 RASSF2P50749 326 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 IL9RQ01113 521 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 LIN9Q5TKA1 542 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 NSMFQ6X4W1 530 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 FAM178BQ8IXR5 827 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 SPDL1Q96EA4 605 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 TRIM6Q9C030 488 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 CCDC188H7C350 402 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 IFNB1P01574 187 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 TROVE2P10155 538 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP3-210ENST00000559192 COPB2P35606 906 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 IL6STP40189 918 aaPredicted RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 PDE6CP51160 858 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 HSPA2P54652 639 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 GRM4Q14833 912 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 CNBD1Q8NA66 436 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 GRK7Q8WTQ7 553 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 SATB2Q9UPW6 733 aa7.69□□□□□ -1.18
USP3-210ENST00000559192 THRAP3Q9Y2W1 955 aaKnown RBP7.69□□□□□ -1.18
USP3-210ENST00000559192 POTEB3A0JP26 581 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 WDR91A4D1P6 747 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 POTECB2RU33 542 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 GMNNO75496 209 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FAM153BP0C7A2 387 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 HSD17B3P37058 310 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FAM153CQ494X1 144 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 POTEBQ6S5H4 581 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 RNF207Q6ZRF8 634 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 MYCBPAPQ8TBZ2 947 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FAM153AQ9UHL3 310 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 BCS1LQ9Y276 419 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 A0A1W2PQJ5 194 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 KIF1CO43896 1103 aaKnown RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 DNAJC8O75937 253 aaPredicted RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 GLI1P08151 1106 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 SCNN1DP51172 638 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 CDC37Q16543 378 aaPredicted RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 HSP90AA5PQ58FG0 334 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 TTMPQ5BVD1 217 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 SFR1Q86XK3 245 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 DNAAF5Q86Y56 855 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 TSEN2Q8NCE0 465 aaKnown RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 CCDC127Q96BQ5 260 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FNBP1Q96RU3 617 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 YY1AP1Q9H869 796 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 ANAPC5Q9UJX4 755 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 PCDHA1Q9Y5I3 950 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 GAS7O60861 476 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FAM107AO95990 144 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 KLRC1P26715 233 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 CDK8P49336 464 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 ANKRD20A3Q5VUR7 823 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 PPP1R21Q6ZMI0 780 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 SEPT8Q92599 483 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 DACT3Q96B18 629 aaPredicted RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 RUNDC3BQ96NL0 473 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 VCPKMTQ9H867 229 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
USP3-210ENST00000559192 MYMKA6NI61 221 aa7.68□□□□□ -1.18
USP3-210ENST00000559192 TRIM37O94972 964 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms