RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 LRCH2Q5VUJ6 765 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 GPR153Q6NV75 609 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 WASF1Q92558 559 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 C8orf76Q96K31 380 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 RNPC3Q96LT9 517 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 AGO3Q9H9G7 860 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 DISC1Q9NRI5 854 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 NOD1Q9Y239 953 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 PCDHA10Q9Y5I2 948 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 CCDC194A0A1B0GVG4 234 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 POTEB3A0JP26 581 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 C22orf31O95567 290 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 FGBP02675 491 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 U2AF2P26368 475 aaKnown RBP eCLIP14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 GJB2P29033 226 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 RABGGTBP53611 331 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 DEFB103AP81534 67 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 KRT76Q01546 638 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 BFSP2Q13515 415 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 IL17AQ16552 155 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 POTEBQ6S5H4 581 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 MTHFD1LQ6UB35 978 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 TRMT1LQ7Z2T5 733 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 KIAA0319LQ8IZA0 1049 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 GUCD1Q96NT3 240 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 PBX4Q9BYU1 374 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 ZNF215Q9UL58 517 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-207ENST00000558936 A0A087WWV3 80 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 GAS7O60861 476 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 KLRC1P26715 233 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 TMEM62Q0P6H9 643 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 MIS18BP1Q6P0N0 1132 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 ANO5Q75V66 913 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 RTN4RL1Q86UN2 441 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 SMAP1Q8IYB5 467 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 RGL1Q9NZL6 768 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 PCDHA2Q9Y5H9 948 aa14.28□□□□□ -0.12
RABGGTA-207ENST00000558936 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 ST18O60284 1047 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 SMAD3P84022 425 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 LPIN1Q14693 890 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 FOXP1Q9H334 677 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 MTMR10Q9NXD2 777 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.13
RABGGTA-207ENST00000558936 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 TTC3P53804 2025 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 WDR64B1ANS9 1081 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 BACH1O14867 736 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 HBP1O60381 514 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 SLITRK3O94933 977 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 PSAPP07602 524 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 XBP1P17861 261 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 RFC2P35250 354 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 WDR5P61964 334 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 PRKCEQ02156 737 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 ZNF174Q15697 407 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 ECM1Q16610 540 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 FBXO47Q5MNV8 452 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 CRIPAKQ8N1N5 446 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 HSD17B14Q9BPX1 270 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 TMX1Q9H3N1 280 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
RABGGTA-207ENST00000558936 IGKV6-21A0A0C4DH24 114 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 TBX3O15119 743 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 GPR32O75388 356 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 OATP04181 439 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 SPATA31C1P0DKV0 1188 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 SLC26A2P50443 739 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 NPEPPSP55786 919 aa14.25□□□□□ -0.13
RABGGTA-207ENST00000558936 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms