RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PLPPR4Q7Z2D5 763 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 CRYGNQ8WXF5 182 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 APBB2Q92870 758 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 BRF1Q92994 677 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 UIMC1Q96RL1 719 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
CASC4-205ENST00000558735 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 KAT6AQ92794 2004 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 IGKV6D-21A0A0A0MT36 114 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 FAM86B1E9PN63 330 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
CASC4-205ENST00000558735 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
CASC4-205ENST00000558735 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
CASC4-205ENST00000558735 CCNE2O96020 404 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 CYP3A4P08684 503 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 FAM86B2P0C5J1 330 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 GHRP10912 638 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 SCG2P13521 617 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 RPS6KB1P23443 525 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 ZNF76P36508 570 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 METAP2P50579 478 aaKnown RBP eCLIP13.13□□□□□ -0.31
CASC4-205ENST00000558735 STAT5BP51692 787 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 AP3B2Q13367 1082 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 NTRK3Q16288 839 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 CTC1Q2NKJ3 1217 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 FBXO47Q5MNV8 452 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 RSPH3Q86UC2 560 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 RTN4RL1Q86UN2 441 aaPredicted RBP13.13□□□□□ -0.31
CASC4-205ENST00000558735 TRAPPC12Q8WVT3 735 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 CDY2AQ9Y6F7 541 aa13.13□□□□□ -0.31
CASC4-205ENST00000558735 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 LTBRP36941 435 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 HERC4Q5GLZ8 1057 aaPredicted RBP13.12□□□□□ -0.31
CASC4-205ENST00000558735 TCEAL5Q5H9L2 206 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 ABHD15Q6UXT9 468 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 HFE2Q6ZVN8 426 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 PHKBQ93100 1093 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 SNX27Q96L92 541 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 YME1L1Q96TA2 773 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
CASC4-205ENST00000558735 AGO3Q9H9G7 860 aaKnown RBP13.12□□□□□ -0.31
CASC4-205ENST00000558735 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
CASC4-205ENST00000558735 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 EDIL3O43854 480 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 IRS1P35568 1242 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 EVCP57679 992 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 GPM6BQ13491 265 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 SMAD2Q15796 467 aaKnown RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 IL17RAQ96F46 866 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 FAM49AQ9H0Q0 323 aaPredicted RBP13.11□□□□□ -0.31
CASC4-205ENST00000558735 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 TRPC6Q9Y210 931 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
CASC4-205ENST00000558735 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
CASC4-205ENST00000558735 RB1P06400 928 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 ATP4AP20648 1035 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 KLRC1P26715 233 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 PSMA5P28066 241 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 CD52P31358 61 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 IER5Q5VY09 327 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 MTHFD1LQ6UB35 978 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 CRIPAKQ8N1N5 446 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 NME8Q8N427 588 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
CASC4-205ENST00000558735 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
CASC4-205ENST00000558735 SMIM35A0A1B0GVV1 85 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 HBP1O60381 514 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 REC8O95072 547 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 IFNAR1P17181 557 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 GNA11P29992 359 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 CIITAP33076 1130 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 SLC26A2P50443 739 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms