RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 DACH2Q96NX9 599 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ZCCHC17Q9NP64 241 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 PFKFB2O60825 505 aa15□□□□□ -0.01
SPG11-210ENST00000558319 N4BP1O75113 896 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 CHGBP05060 677 aa15□□□□□ -0.01
SPG11-210ENST00000558319 FAM26FQ5R3K3 315 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ACBD5Q5T8D3 534 aaPredicted RBP15□□□□□ -0.01
SPG11-210ENST00000558319 ING2Q9H160 280 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ZBTB1Q9Y2K1 713 aa15□□□□□ -0.01
SPG11-210ENST00000558319 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
SPG11-210ENST00000558319 NEK2P51955 445 aa15□□□□□ -0.01
SPG11-210ENST00000558319 SIK1P57059 783 aa15□□□□□ -0.01
SPG11-210ENST00000558319 RWDD2BP57060 319 aa15□□□□□ -0.01
SPG11-210ENST00000558319 NOP14P78316 857 aaKnown RBP15□□□□□ -0.01
SPG11-210ENST00000558319 MYO1EQ12965 1108 aa15□□□□□ -0.01
SPG11-210ENST00000558319 PARP9Q8IXQ6 854 aa15□□□□□ -0.01
SPG11-210ENST00000558319 HMGB1P1B2RPK0 211 aaPredicted RBP15□□□□□ -0.01
SPG11-210ENST00000558319 SNAP23O00161 211 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ATP5JP18859 108 aa15□□□□□ -0.01
SPG11-210ENST00000558319 CCND2P30279 289 aa15□□□□□ -0.01
SPG11-210ENST00000558319 PTK2Q05397 1052 aa15□□□□□ -0.01
SPG11-210ENST00000558319 DCAF4L1Q3SXM0 396 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ZSWIM6Q9HCJ5 1215 aa15□□□□□ -0.01
SPG11-210ENST00000558319 ZFP69BQ9UJL9 534 aa15□□□□□ -0.01
SPG11-210ENST00000558319 MAP3K7CLP57077 242 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 KCNA1Q09470 495 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 THOC5Q13769 683 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 BBS9Q3SYG4 887 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 DSTYKQ6XUX3 929 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 UPF3AQ9H1J1 476 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 YEATS2Q9ULM3 1422 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 NCLNQ969V3 563 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 PFDN6O15212 129 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 AFPP02771 609 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 CASP1P29466 404 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 NAA30Q147X3 362 aaPredicted RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 SLMAPQ14BN4 828 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 GLE1Q53GS7 698 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 TTC1Q99614 292 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 ENO4A6NNW6 628 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 CD2BP2O95400 341 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 PDIA3P30101 505 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 RAD23BP54727 409 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 ZNF341Q9BYN7 854 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 DCTN4Q9UJW0 460 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 ZNF229Q9UJW7 825 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 COL4A3BPQ9Y5P4 624 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 MCF2LO15068 1137 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 HADHAP40939 763 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 CAPRIN2Q6IMN6 1127 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 TOGARAM2Q6ZUX3 1019 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 PPP1R36Q96LQ0 422 aa14.99□□□□□ -0.01
SPG11-210ENST00000558319 SETD1BQ9UPS6 1966 aaKnown RBP14.99□□□□□ -0.01
SPG11-210ENST00000558319 GGT7Q9UJ14 662 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 CUL7Q14999 1698 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 MFAP3P55082 362 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 MRPS15P82914 257 aaKnown RBP14.98□□□□□ -0.01
SPG11-210ENST00000558319 UBE3AQ05086 875 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 PSMD2Q13200 908 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 DYNC1I2Q13409 638 aaKnown RBP14.98□□□□□ -0.01
SPG11-210ENST00000558319 C6orf118Q5T5N4 469 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 ARMC2Q8NEN0 867 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 MED23Q9ULK4 1368 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 CHL1O00533 1208 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 E2F6O75461 281 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 DCTN3O75935 186 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 ZBTB7AO95365 584 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 CATSPER3Q86XQ3 398 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 SCN4BQ8IWT1 228 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 OR6B3Q8NGW1 331 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 CCHCR1Q8TD31 782 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 ATG3Q9NT62 314 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 GJB4Q9NTQ9 266 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 GCNT4Q9P109 453 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 RAPGEF6Q8TEU7 1601 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 CRLF3Q8IUI8 442 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 NT5C1BQ96P26 610 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 TMPRSS15P98073 1019 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 TFDP1Q14186 410 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
SPG11-210ENST00000558319 SEC24DO94855 1032 aaPredicted RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 STAT2P52630 851 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 TM6SF1Q9BZW5 370 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 ZRANB2O95218 330 aaKnown RBP eCLIP14.97□□□□□ -0.01
SPG11-210ENST00000558319 SLC27A3Q5K4L6 730 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 ZNF507Q8TCN5 953 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 FAM161BQ96MY7 647 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PUS7LQ9H0K6 701 aaKnown RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 LRRC4Q9HBW1 653 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 NDUFA10O95299 355 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 HSPA4LO95757 839 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 MAGOHP61326 146 aaKnown RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 KCTD17Q8N5Z5 321 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PYROXD1Q8WU10 500 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PBKQ96KB5 322 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms