RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SPC25Q9HBM1 224 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 NCOA5Q9HCD5 579 aaKnown RBP8.92□□□□□ -0.98
RTF1-205ENST00000558298 C6orf50Q9HD87 102 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 MYO1AQ9UBC5 1043 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 NR2E3Q9Y5X4 410 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 WDR81Q562E7 1941 aa8.92□□□□□ -0.98
RTF1-205ENST00000558298 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PPC1 479 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PQ45 241 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 A0A1W2PQY0 241 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 SMCO2A6NFE2 343 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 A6NJR5 290 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 POLR3GO15318 223 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 STX10O60499 249 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 KPNA6O60684 536 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 CABYRO75952 493 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 PGK1P00558 417 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 SMPD1P17405 629 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 XBP1P17861 261 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 HOXA13P31271 388 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 CIITAP33076 1130 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 BMP8BP34820 402 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 ADCYAP1R1P41586 468 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 FXR1P51114 621 aaKnown RBP eCLIP8.91□□□□□ -0.98
RTF1-205ENST00000558298 CCT2P78371 535 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 MRPS9P82933 396 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 USP17L6PQ6QN14 398 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 MICALCLQ6ZW33 695 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 RSRC2Q7L4I2 434 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 TADA2BQ86TJ2 420 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 C7orf61Q8IZ16 206 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 REXO1Q8N1G1 1221 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 NEK11Q8NG66 645 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 IL31RAQ8NI17 732 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 PHF20Q9BVI0 1012 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 SLC26A6Q9BXS9 759 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 SENP6Q9GZR1 1112 aaPredicted RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 HOOK1Q9UJC3 728 aaKnown RBP8.91□□□□□ -0.98
RTF1-205ENST00000558298 RCOR1Q9UKL0 485 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 PCDHA4Q9UN74 947 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 UBIAD1Q9Y5Z9 338 aa8.91□□□□□ -0.98
RTF1-205ENST00000558298 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 KBTBD13C9JR72 458 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 H3BQV1 296 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 CLSTN1O94985 981 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 LARGE1O95461 756 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 FDPSP14324 419 aaKnown RBP8.9□□□□□ -0.98
RTF1-205ENST00000558298 LIG1P18858 919 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 EIF2AK2P19525 551 aaKnown RBP8.9□□□□□ -0.98
RTF1-205ENST00000558298 CPT1AP50416 773 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 PPP2R3AQ06190 1150 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 ARHGAP1Q07960 439 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 TMEM63BQ5T3F8 832 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 E4F1Q66K89 784 aaPredicted RBP8.9□□□□□ -0.98
RTF1-205ENST00000558298 SLC39A5Q6ZMH5 540 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 CCDC83Q8IWF9 413 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 CKAP2LQ8IYA6 745 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 SLC43A3Q8NBI5 491 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 GIMAP8Q8ND71 665 aaPredicted RBP8.9□□□□□ -0.98
RTF1-205ENST00000558298 BANK1Q8NDB2 785 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 PPTC7Q8NI37 304 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 FUT8Q9BYC5 575 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 ANO3Q9BYT9 981 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 WDR11Q9BZH6 1224 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 CXorf56Q9H5V9 222 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 PDGFCQ9NRA1 345 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 DACH1Q9UI36 760 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 RAB21Q9UL25 225 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 PCDHA6Q9UN73 950 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 PCDHA8Q9Y5H6 950 aa8.9□□□□□ -0.98
RTF1-205ENST00000558298 DOCK5Q9H7D0 1870 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 NFASCO94856 1347 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 MROH7Q68CQ1 1323 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 hCG_1642624A0A1W2PR95 340 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 ZEB2O60315 1214 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 URI1O94763 535 aaPredicted RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 ARIH2O95376 493 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 GH1P01241 217 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 UBA1P22314 1058 aaKnown RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 RDXP35241 583 aaKnown RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 CDK7P50613 346 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 USP11P51784 963 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 ACLYP53396 1101 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 RTP1P59025 263 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 NEDD9Q14511 834 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 CAMK4Q16566 473 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 FSCN1Q16658 493 aaKnown RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 LONRF2Q1L5Z9 754 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 FOXD4L6Q3SYB3 417 aaPredicted RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 CEP55Q53EZ4 464 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 BRDTQ58F21 947 aaPredicted RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 FOXD4L3Q6VB84 417 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms