RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ASGR2P07307 311 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 HSP90AA1P07900 732 aaKnown RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PMLP29590 882 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 LIMS1P48059 325 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 SLC6A11P48066 632 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 GYS2P54840 703 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 POU5F1BQ06416 359 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 TESK1Q15569 626 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 VPS72Q15906 364 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PRSS53Q2L4Q9 553 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 KRBA2Q6ZNG9 492 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 C16orf86Q6ZW13 317 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 CEP68Q76N32 757 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 RIOX2Q8IUF8 465 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 SP8Q8IXZ3 490 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 TMEM145Q8NBT3 493 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PANK1Q8TE04 598 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 DPF3Q92784 378 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 ZNF669Q96BR6 464 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 DDX11Q96FC9 970 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 YIPF4Q9BSR8 244 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 AARSD1Q9BTE6 412 aaKnown RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 THRAP3Q9Y2W1 955 aaKnown RBP5.2□□□□□ -1.58
LRRC28-205ENST00000558248 PCDHA2Q9Y5H9 948 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 ATRNO75882 1429 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 MAST1Q9Y2H9 1570 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 BCL9LQ86UU0 1499 aa5.2□□□□□ -1.58
LRRC28-205ENST00000558248 KRT18P05783 430 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 BMP7P18075 431 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 FBLN1P23142 703 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 FPR2P25090 351 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 BCL6P41182 706 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 C1QTNF8P60827 252 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 FOXO4P98177 505 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 FOXD4Q12950 439 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 LSAMPQ13449 338 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 HLTFQ14527 1009 aaKnown RBP eCLIP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 DHX8Q14562 1220 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 R3HDM1Q15032 1099 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 SF1Q15637 639 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 ZRSR2Q15696 482 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 WDR78Q5VTH9 848 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 ETV3LQ6ZN32 361 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 B3GNT8Q7Z7M8 397 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 ZC3H18Q86VM9 953 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 CCDC103Q8IW40 242 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 WDR75Q8IWA0 830 aaKnown RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 TMEFF1Q8IYR6 380 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 KREMEN2Q8NCW0 462 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 CPA5Q8WXQ8 436 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 IL17RAQ96F46 866 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 PCDH18Q9HCL0 1135 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 JADE2Q9NQC1 790 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 TMEM260Q9NX78 707 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 SWAP70Q9UH65 585 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 RAPGEFL1Q9UHV5 662 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 PMF1-BGLAPU3KQ54 211 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 NCOA3Q9Y6Q9 1424 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.19□□□□□ -1.58
LRRC28-205ENST00000558248 CCDC18Q5T9S5 1454 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 NHSL1Q5SYE7 1610 aa5.19□□□□□ -1.58
LRRC28-205ENST00000558248 TRAV20A0A0B4J274 112 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 ESYT3A0FGR9 886 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 H7BY64 318 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 MAFKO60675 156 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 DGKIO75912 1065 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 LDHAP00338 332 aaKnown RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 INHBBP09529 407 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 MASP1P48740 699 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 EPHB1P54762 984 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 EVA1CP58658 441 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 CAP1Q01518 475 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 CYP4F3Q08477 520 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 PPP2R5AQ15172 486 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 MTERF2Q49AM1 385 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 MAP9Q49MG5 647 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 SLC35F1Q5T1Q4 408 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 USP53Q70EK8 1073 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 KRT26Q7Z3Y9 468 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 AMOTL1Q8IY63 956 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 Q8N1Y9 231 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 LINC01356Q8N9X3 169 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 IPO9Q96P70 1041 aaKnown RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 EPB41L4AQ9HCS5 686 aaPredicted RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 PARD6AQ9NPB6 346 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 CLDND1Q9NY35 253 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 TMEFF2Q9UIK5 374 aaPredicted RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 SIT1Q9Y3P8 196 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 X6R8D5 127 aa5.18□□□□□ -1.58
LRRC28-205ENST00000558248 CHD2O14647 1828 aaKnown RBP5.18□□□□□ -1.58
LRRC28-205ENST00000558248 EP400Q96L91 3159 aa5.17□□□□□ -1.58
LRRC28-205ENST00000558248 CASKIN1Q8WXD9 1431 aa5.17□□□□□ -1.58
LRRC28-205ENST00000558248 PIK3C2BO00750 1634 aa5.17□□□□□ -1.58
LRRC28-205ENST00000558248 FAM221BA6H8Z2 402 aa5.17□□□□□ -1.58
LRRC28-205ENST00000558248 CCDC85CA6NKD9 419 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms