RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 ZNF862O60290 1169 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 BMP15O95972 392 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 OATP04181 439 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 PRPHP41219 470 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 TECP42680 631 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
CDK12-203ENST00000558240 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDK12-203ENST00000558240 PDIA5Q14554 519 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 UGCGQ16739 394 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 MFSD5Q6N075 450 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 BADQ92934 168 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 GDF15Q99988 308 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 CEP131Q9UPN4 1083 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 LAMA2P24043 3122 aaKnown RBP13.51□□□□□ -0.25
CDK12-203ENST00000558240 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 CAND2O75155 1236 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 SLITRK3O94933 977 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 RPLP2P05387 115 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 CYP2C18P33260 490 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 BMP8BP34820 402 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 ATP2C1P98194 919 aaPredicted RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 PRKCEQ02156 737 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 MARCH8Q5T0T0 291 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 ARL6IP4Q66PJ3 421 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 TMEM199Q8N511 208 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 BANK1Q8NDB2 785 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 HSD17B14Q9BPX1 270 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 EIF2AK1Q9BQI3 630 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 NIFKQ9BYG3 293 aaKnown RBP13.5□□□□□ -0.25
CDK12-203ENST00000558240 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 PPP1R12CQ9BZL4 782 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 TUBE1Q9UJT0 475 aa13.5□□□□□ -0.25
CDK12-203ENST00000558240 TCHHQ07283 1943 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 UMODL1Q5DID0 1318 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 POTEMA6NI47 508 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 ZBTB42B2RXF5 422 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 STBD1O95210 358 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
CDK12-203ENST00000558240 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
CDK12-203ENST00000558240 CKBP12277 381 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 IGBP1P78318 339 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 DTHD1Q6ZMT9 781 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 WNT8BQ93098 351 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 LXNQ9BS40 222 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 WNT8AQ9H1J5 351 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 RGL1Q9NZL6 768 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
CDK12-203ENST00000558240 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 MAGEB2O15479 319 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 LYPLA2O95372 231 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 SELPP16109 830 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 MUTP22033 750 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 KLRC1P26715 233 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 RFC2P35250 354 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 CCL23P55773 120 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 FPGSQ05932 587 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDK12-203ENST00000558240 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
CDK12-203ENST00000558240 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
CDK12-203ENST00000558240 IL17AQ16552 155 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
CDK12-203ENST00000558240 RSPH3Q86UC2 560 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 IGSF22Q8N9C0 903 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 POLR3CQ9BUI4 534 aaPredicted RBP13.48□□□□□ -0.25
CDK12-203ENST00000558240 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
CDK12-203ENST00000558240 SMIM35A0A1B0GVV1 85 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 F13A1P00488 732 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDK12-203ENST00000558240 RPA1P27694 616 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 THPOP40225 353 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
CDK12-203ENST00000558240 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 ANO5Q75V66 913 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 LRRC8DQ7L1W4 858 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
CDK12-203ENST00000558240 RPUSD2Q8IZ73 545 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms