RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 PSMC6P62333 389 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 SNX17Q15036 470 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CATSPER3Q86XQ3 398 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-204ENST00000558172 NRCAMQ92823 1304 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CALML4Q96GE6 196 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 ALPK3Q96L96 1907 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 LXNQ9BS40 222 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 HTATIP2Q9BUP3 242 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 CSRNP2Q9H175 543 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 KDM3AQ9Y4C1 1321 aa11.73□□□□□ -0.53
LRRC28-204ENST00000558172 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 TLR3O15455 904 aaKnown RBP11.72□□□□□ -0.53
LRRC28-204ENST00000558172 ZNF862O60290 1169 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 MED24O75448 989 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 SMIM10L2AP0DMW4 78 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 SMIM10L2BP0DMW5 78 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 MARK3P27448 753 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 TXLNAP40222 546 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 ME1P48163 572 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 PRKCEQ02156 737 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CTTNQ14247 550 aaKnown RBP11.72□□□□□ -0.53
LRRC28-204ENST00000558172 UGCGQ16739 394 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 HYIQ5T013 277 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CABP7Q86V35 215 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CDK5RAP3Q96JB5 506 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 NIFKQ9BYG3 293 aaKnown RBP11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 ANKEF1Q9NU02 776 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 GTF2IRD1Q9UHL9 959 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 PCDHA7Q9UN72 937 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 PPME1Q9Y570 386 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 MYH11P35749 1972 aa11.72□□□□□ -0.53
LRRC28-204ENST00000558172 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 STBD1O95210 358 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 INSRRP14616 1297 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 CDC25AP30304 524 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 HOXC8P31273 242 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 YWHABP31946 246 aaKnown RBP11.71□□□□□ -0.53
LRRC28-204ENST00000558172 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
LRRC28-204ENST00000558172 GRIN1Q05586 938 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 ADALQ6DHV7 355 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 ANKRD33Q7Z3H0 272 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 EXOC8Q8IYI6 725 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
LRRC28-204ENST00000558172 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 DNM3Q9UQ16 869 aa11.71□□□□□ -0.53
LRRC28-204ENST00000558172 PP2D1A8MPX8 630 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 MAGEB2O15479 319 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 GRIK4Q16099 956 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 CLEC17AQ6ZS10 378 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 ANO5Q75V66 913 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 JPH2Q9BR39 696 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 SETD4Q9NVD3 440 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 FAM13BQ9NYF5 915 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
LRRC28-204ENST00000558172 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
LRRC28-204ENST00000558172 GOLGA6L4A6NEF3 574 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 CD4P01730 458 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 RPLP2P05387 115 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 CMA1P23946 247 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 RGS19P49795 217 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 RTP1P59025 263 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 ADAM17P78536 824 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 TLE2Q04725 743 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 TARBP2Q15633 366 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
LRRC28-204ENST00000558172 ECM1Q16610 540 aa11.69□□□□□ -0.54
LRRC28-204ENST00000558172 PTGISQ16647 500 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms