RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 KIF11P52732 1056 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 SEC23AQ15436 765 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 ZNF174Q15697 407 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 TKFCQ3LXA3 575 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 ZNF568Q3ZCX4 644 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 CNNM4Q6P4Q7 775 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 RALYLQ86SE5 291 aaKnown RBP4.92□□□□□ -1.62
SPG11-206ENST00000558093 IFNL2Q8IZJ0 200 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 ASB15Q8WXK1 588 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 GBP4Q96PP9 640 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 UCKL1Q9NWZ5 548 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 GALNT8Q9NY28 637 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 INVSQ9Y283 1065 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 B3GALT1Q9Y5Z6 326 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 DUSP10Q9Y6W6 482 aa4.92□□□□□ -1.62
SPG11-206ENST00000558093 PRAMEF22A3QJZ6 481 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 PRICKLE3O43900 615 aaPredicted RBP4.91□□□□□ -1.62
SPG11-206ENST00000558093 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
SPG11-206ENST00000558093 IL18BPO95998 194 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 CELA3BP08861 270 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 COL6A1P12109 1028 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 ADCY8P40145 1251 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 NFATC3Q12968 1075 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 TM4SF20Q53R12 229 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 CDCA2Q69YH5 1023 aaPredicted RBP4.91□□□□□ -1.62
SPG11-206ENST00000558093 GPR155Q7Z3F1 870 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 DHX37Q8IY37 1157 aaKnown RBP4.91□□□□□ -1.62
SPG11-206ENST00000558093 KBTBD2Q8IY47 623 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 NIM1KQ8IY84 436 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 CXorf38Q8TB03 319 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 CALML6Q8TD86 181 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 NINJ1Q92982 152 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 JADE2Q9NQC1 790 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 BTBD7Q9P203 1132 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 PLAAQ9Y263 795 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 ZKSCAN5Q9Y2L8 839 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 TMA7Q9Y2S6 64 aaKnown RBP4.91□□□□□ -1.62
SPG11-206ENST00000558093 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
SPG11-206ENST00000558093 GAS7O60861 476 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 KLHL18O94889 574 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 MECP2P51608 486 aaKnown RBP4.9□□□□□ -1.63
SPG11-206ENST00000558093 IL13RA1P78552 427 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 PLP2Q04941 152 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 SURF1Q15526 300 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 ZFYVE27Q5T4F4 411 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 CC2D1AQ6P1N0 951 aaPredicted RBP4.9□□□□□ -1.63
SPG11-206ENST00000558093 Q6ZUG5 572 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 OTOP1Q7RTM1 612 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 OTOP2Q7RTS6 562 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 LRRTM3Q86VH5 581 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 REXO1L1PQ8IX06 675 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 DLG3Q92796 817 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 MFSD3Q96ES6 412 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 BTBD2Q9BX70 525 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 FBXO10Q9UK96 956 aa4.9□□□□□ -1.63
SPG11-206ENST00000558093 B8ZZF3 427 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 CBX4O00257 560 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 LAMTOR5O43504 91 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 B4GALT3O60512 393 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 CUTAO60888 179 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 HMGCRP04035 888 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 POLD1P28340 1107 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 SDHAP31040 664 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 ECE1P42892 770 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 SART3Q15020 963 aaKnown RBP4.89□□□□□ -1.63
SPG11-206ENST00000558093 CATSPEREQ5SY80 951 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 ARHGEF18Q6ZSZ5 1173 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 KIAA1958Q8N8K9 716 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 E2F7Q96AV8 911 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 ACSS2Q9NR19 701 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 B4GALT6Q9UBX8 382 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
SPG11-206ENST00000558093 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 RASSF10A6NK89 507 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 K7ESM1 405 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 TRAF5O00463 557 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 ENPP3O14638 875 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 B4GALT4O60513 344 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 MPIG6BO95866 241 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 PLATP00750 562 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 ZBTB48P10074 688 aaPredicted RBP4.88□□□□□ -1.63
SPG11-206ENST00000558093 FNTBP49356 437 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 KCNQ1P51787 676 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 RRADP55042 308 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 MAP3K12Q12852 859 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 USP10Q14694 798 aaKnown RBP4.88□□□□□ -1.63
SPG11-206ENST00000558093 LRSAM1Q6UWE0 723 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 GLB1LQ6UWU2 654 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
SPG11-206ENST00000558093 PPM1KQ8N3J5 372 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 MBD6Q96DN6 1003 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 CARD11Q9BXL7 1154 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 OR10A5Q9H207 317 aa4.88□□□□□ -1.63
SPG11-206ENST00000558093 SLKQ9H2G2 1235 aaPredicted RBP4.88□□□□□ -1.63
SPG11-206ENST00000558093 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPG11-206ENST00000558093 IFT57Q9NWB7 429 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms