RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GPR155Q7Z3F1 870 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 DAAM2Q86T65 1068 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 NME9Q86XW9 330 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 NOSTRINQ8IVI9 506 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 FMR1NBQ8N0W7 255 aaPredicted RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 PRR18Q8N4B5 295 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 MYCT1Q8N699 235 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 NAXEQ8NCW5 288 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PIWIL2Q8TC59 973 aaKnown RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 COA7Q96BR5 231 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 LTV1Q96GA3 475 aaPredicted RBP4.57□□□□□ -1.68
TDP1-217ENST00000557782 TCTN2Q96GX1 697 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 RAX2Q96IS3 184 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 Q96M66 194 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PSMG3-AS1Q96PY0 264 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 CERS4Q9HA82 394 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 DMRT3Q9NQL9 472 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PDLIM7Q9NR12 457 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 GPRC5BQ9NZH0 403 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 ADGRE2Q9UHX3 823 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 TUBD1Q9UJT1 453 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 PADI4Q9UM07 663 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 SLC4A7Q9Y6M7 1214 aa4.57□□□□□ -1.68
TDP1-217ENST00000557782 SHISA3A0PJX4 238 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 KCNK3O14649 394 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 FGF10O15520 208 aaPredicted RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 NPHS1O60500 1241 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 EOMESO95936 686 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 AMY2AP04746 511 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 AMY2BP19961 511 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 AMPD1P23109 780 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 TNFSF4P23510 183 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 PTX3P26022 381 aaPredicted RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 HTR1BP28222 390 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 BCL6P41182 706 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 MANFP55145 182 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 PCBP3P57721 371 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 POU5F1Q01860 360 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 BLMHQ13867 455 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 PDE1CQ14123 709 aaPredicted RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 EPHA7Q15375 998 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 IFI16Q16666 785 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 CT83Q5H943 113 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 DACT2Q5SW24 774 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 MBNL2Q5VZF2 373 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 TTLL5Q6EMB2 1281 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 ESRP1Q6NXG1 681 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 CYP2R1Q6VVX0 501 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 ESPNLQ6ZVH7 1005 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 CPNE8Q86YQ8 564 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 SIRT2Q8IXJ6 389 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 NLGN4XQ8N0W4 816 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 NAT16Q8N8M0 369 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 GALNT6Q8NCL4 622 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 C1orf131Q8NDD1 294 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 IL17REQ8NFR9 667 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 SNRNP27Q8WVK2 155 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 AUTS2Q8WXX7 1259 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 BTBD6Q96KE9 485 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 PPM1MQ96MI6 270 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 PTCHD1Q96NR3 888 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 SLC2A13Q96QE2 648 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 JAM3Q9BX67 310 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 BTBD1Q9H0C5 482 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 TRIT1Q9H3H1 467 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 SEMA6CQ9H3T2 930 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 SERPINB13Q9UIV8 391 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 EDARQ9UNE0 448 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 B3GALT1Q9Y5Z6 326 aa4.56□□□□□ -1.68
TDP1-217ENST00000557782 LRRFIP2Q9Y608 721 aaKnown RBP4.56□□□□□ -1.68
TDP1-217ENST00000557782 A0A0A0MRY4 1105 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 FOXN3O00409 490 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 CLASP2O75122 1294 aaKnown RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 SYPP08247 313 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 RPL17P18621 184 aaKnown RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 ABCB4P21439 1286 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 IL6STP40189 918 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 TECP42680 631 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 FNTBP49356 437 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 CEBPAP49715 358 aaPredicted RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 FXR1P51114 621 aaKnown RBP eCLIP4.55□□□□□ -1.68
TDP1-217ENST00000557782 AGFG1P52594 562 aaKnown RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 SRSF11Q05519 484 aaKnown RBP4.55□□□□□ -1.68
TDP1-217ENST00000557782 PPFIA1Q13136 1202 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 ANO4Q32M45 955 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 CCDC38Q502W7 563 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 RTP2Q5QGT7 225 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 IZUMO3Q5VZ72 239 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 CPZQ66K79 652 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 MBLAC2Q68D91 279 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 PPP4R3AQ6IN85 833 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 C22orf34Q6ZV56 151 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 MAEAQ7L5Y9 396 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 KCNK18Q7Z418 384 aa4.55□□□□□ -1.68
TDP1-217ENST00000557782 ANKRD18AQ8IVF6 992 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms