RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ERAP1Q9NZ08 941 aa18.94■□□□□ 0.62
NEK9-211ENST00000557673 MUC6Q6W4X9 2439 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 SPDYE3A6NKU9 549 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 hCG_1984214I3L0E3 225 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 TCF7P36402 384 aaPredicted RBP18.93■□□□□ 0.62
NEK9-211ENST00000557673 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 CPLX2Q6PUV4 134 aaKnown RBP18.93■□□□□ 0.62
NEK9-211ENST00000557673 ADHFE1Q8IWW8 467 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 ZNF713Q8N859 430 aaPredicted RBP18.93■□□□□ 0.62
NEK9-211ENST00000557673 NECAB1Q8N987 351 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 SEPT1Q8WYJ6 367 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 POP1Q99575 1024 aaKnown RBP18.93■□□□□ 0.62
NEK9-211ENST00000557673 PLVAPQ9BX97 442 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 EHMT1Q9H9B1 1298 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 ADGRA3Q8IWK6 1321 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 STK36Q9NRP7 1315 aa18.93■□□□□ 0.62
NEK9-211ENST00000557673 POTEB3A0JP26 581 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 STXBP3O00186 592 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 PRPF3O43395 683 aaKnown RBP18.92■□□□□ 0.62
NEK9-211ENST00000557673 PPFIA3O75145 1194 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 GHRP10912 638 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 SCG2P13521 617 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 ZP2Q05996 745 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 PFKFB3Q16875 520 aaPredicted RBP18.92■□□□□ 0.62
NEK9-211ENST00000557673 PPP1R18Q6NYC8 613 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 POTEBQ6S5H4 581 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 GLG1Q92896 1179 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 TNPO1Q92973 898 aaKnown RBP18.92■□□□□ 0.62
NEK9-211ENST00000557673 CLP1Q92989 425 aaKnown RBP18.92■□□□□ 0.62
NEK9-211ENST00000557673 PPP2R3CQ969Q6 453 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 KCNH6Q9H252 994 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 SH2B1Q9NRF2 756 aaPredicted RBP18.92■□□□□ 0.62
NEK9-211ENST00000557673 TUBE1Q9UJT0 475 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 PCDHA6Q9UN73 950 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 TELO2Q9Y4R8 837 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 PCDHA8Q9Y5H6 950 aa18.92■□□□□ 0.62
NEK9-211ENST00000557673 ENPP3O14638 875 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 MAFGO15525 162 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 CDKL5O76039 1030 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 CTDNEP1O95476 244 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 BTG3Q14201 252 aaPredicted RBP18.91■□□□□ 0.62
NEK9-211ENST00000557673 LPIN1Q14693 890 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 GRIK4Q16099 956 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 PKN1Q16512 942 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 TRIM22Q8IYM9 498 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 PGBD1Q96JS3 809 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 ZSCAN31Q96LW9 406 aaPredicted RBP18.91■□□□□ 0.62
NEK9-211ENST00000557673 SMARCAD1Q9H4L7 1026 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 BARHL2Q9NY43 387 aa18.91■□□□□ 0.62
NEK9-211ENST00000557673 MBLAC1A4D2B0 266 aaPredicted RBP18.9■□□□□ 0.62
NEK9-211ENST00000557673 RRN3P2A6NIE6 340 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 C19orf67A6NJJ6 358 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 ITGB5P18084 799 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 ADCY7P51828 1080 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 CTC1Q2NKJ3 1217 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 RUFY4Q6ZNE9 571 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 TSHZ1Q6ZSZ6 1077 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 FTHL17Q9BXU8 183 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 RALGAPA2Q2PPJ7 1873 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 KAT6AQ92794 2004 aa18.9■□□□□ 0.62
NEK9-211ENST00000557673 SMCO2A6NFE2 343 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 GRM6O15303 877 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 KCNA2P16389 499 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 MCM2P49736 904 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 SSRP1Q08945 709 aaKnown RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 MGAT3Q09327 533 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 MTMR1Q13613 665 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 SMAD2Q15796 467 aaKnown RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 NAALADL2Q58DX5 795 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 FBXO47Q5MNV8 452 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 IER5Q5VY09 327 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 NSUN7Q8NE18 718 aaKnown RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 DNAJB3Q8WWF6 145 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 ZNF689Q96CS4 500 aaPredicted RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 RC3H2Q9HBD1 1191 aaKnown RBP18.89■□□□□ 0.61
NEK9-211ENST00000557673 TMEM260Q9NX78 707 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 PKD2L1Q9P0L9 805 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 UBIAD1Q9Y5Z9 338 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
NEK9-211ENST00000557673 GSTTP1A0A1W2PQM5 241 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 M0QZ92 97 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 ATP9AO75110 1047 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 DGKIO75912 1065 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 DEXIO95424 95 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 MMP1P03956 469 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 MARK3P27448 753 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 LTBRP36941 435 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 MRPS6P82932 125 aaKnown RBP18.88■□□□□ 0.61
NEK9-211ENST00000557673 HYAL1Q12794 435 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
NEK9-211ENST00000557673 CCDC83Q8IWF9 413 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 P2RX5Q93086 422 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 ANO3Q9BYT9 981 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 AZI2Q9H6S1 392 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 CDY2AQ9Y6F7 541 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 NLRC5Q86WI3 1866 aa18.88■□□□□ 0.61
NEK9-211ENST00000557673 LINC00271P0C7V0 271 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms