RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 RGL1Q9NZL6 768 aa11.42□□□□□ -0.58
GABRB3-212ENST00000557641 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
GABRB3-212ENST00000557641 ZNF236Q9UL36 1845 aa11.42□□□□□ -0.58
GABRB3-212ENST00000557641 MYMKA6NI61 221 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 TNPO2O14787 897 aaKnown RBP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 IKBKBO14920 756 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 NKRFO15226 690 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 KLRC4O43908 158 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 SSBP05455 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 SUPT20HL2P0C7V6 817 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 SLC12A3P55017 1021 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 ACTR2P61160 394 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 TPM4P67936 248 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 STIM1Q13586 685 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 KIF22Q14807 665 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 COBLL1Q53SF7 1204 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 OLFML2BQ68BL8 750 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 CCDC62Q6P9F0 684 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 ABHD15Q6UXT9 468 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 OTUD6AQ7L8S5 288 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 GPBP1Q86WP2 473 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 CCDC65Q8IXS2 484 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 DDX12PQ92771 950 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 ZIC5Q96T25 663 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 TIPINQ9BVW5 301 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 MLXIPQ9HAP2 919 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
GABRB3-212ENST00000557641 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-212ENST00000557641 IGKV6D-21A0A0A0MT36 114 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 ARHGEF35A5YM69 484 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 BECN2A8MW95 431 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 GOLGA6L19H0YKK7 550 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 AOC2O75106 756 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 FARP2O94887 1054 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 GGPS1O95749 300 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 KRT18P05783 430 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 TXNP10599 105 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 XRCC5P13010 732 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 CYP11B2P19099 503 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 PSMC6P62333 389 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 SP2Q02086 613 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 LAMC2Q13753 1193 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 DHX8Q14562 1220 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 CELF3Q5SZQ8 465 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 IQSEC1Q6DN90 963 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 C11orf57Q6ZUT1 292 aaPredicted RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 EEPD1Q7L9B9 569 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
GABRB3-212ENST00000557641 BANK1Q8NDB2 785 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 APBA2Q99767 749 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 BHMT2Q9H2M3 363 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 CBX8Q9HC52 389 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
GABRB3-212ENST00000557641 KIF20AO95235 890 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 SNAI1O95863 264 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 GH1P01241 217 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 GAP43P17677 238 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 BMP6P22004 513 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 GUCY2CP25092 1073 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 CASP1P29466 404 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 YWHABP31946 246 aaKnown RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 SLC26A2P50443 739 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 IQCB1Q15051 598 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 XKR3Q5GH77 459 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 SWSAP1Q6NVH7 229 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 TAPT1Q6NXT6 567 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 AFAP1L1Q8TED9 768 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 ZNF302Q9NR11 478 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 GABBR1Q9UBS5 961 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 SEL1LQ9UBV2 794 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 GJD2Q9UKL4 321 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 ODF2LQ9ULJ1 636 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 COL4A3BPQ9Y5P4 624 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-212ENST00000557641 LCTP09848 1927 aa11.39□□□□□ -0.59
GABRB3-212ENST00000557641 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
GABRB3-212ENST00000557641 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
GABRB3-212ENST00000557641 NOP56O00567 594 aaKnown RBP11.38□□□□□ -0.59
GABRB3-212ENST00000557641 BACH1O14867 736 aa11.38□□□□□ -0.59
GABRB3-212ENST00000557641 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
GABRB3-212ENST00000557641 GNRH1P01148 92 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms