RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LCTP09848 1927 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 LOXHD1Q8IVV2 1947 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 N4BP3O15049 544 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 ZBTB39O15060 712 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF131P52739 623 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 STXBP4Q6ZWJ1 553 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 OTUD6AQ7L8S5 288 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 ABRAQ8N0Z2 381 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF526Q8TF50 670 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-233ENST00000557529 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
SHMT2-233ENST00000557529 ASB14A6NK59 587 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 EIF3DO15371 548 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 STRNO43815 780 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 PGK2P07205 417 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 SFPQP23246 707 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 RARRES1P49788 294 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 ACTR2P61160 394 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 NEDD9Q14511 834 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 UGCGQ16739 394 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 BMT2Q1RMZ1 405 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 GLIS3Q8NEA6 775 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 MORC4Q8TE76 937 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 CACTINQ8WUQ7 758 aaKnown RBP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 MRPL44Q9H9J2 332 aaKnown RBP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 ZCCHC17Q9NP64 241 aaKnown RBP13.81□□□□□ -0.2
SHMT2-233ENST00000557529 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
SHMT2-233ENST00000557529 UBE4BO95155 1302 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 MANSC4A6NHS7 340 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-233ENST00000557529 LGALS16A8MUM7 142 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF500O60304 480 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-233ENST00000557529 GNA14O95837 355 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 SUPT20HL2P0C7V6 817 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
SHMT2-233ENST00000557529 FSTL1Q12841 308 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 TBX2Q13207 712 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-233ENST00000557529 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 ABHD15Q6UXT9 468 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 CNOT6LQ96LI5 555 aaKnown RBP13.8□□□□□ -0.2
SHMT2-233ENST00000557529 FGD4Q96M96 766 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 PORCNQ9H237 461 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 R3HDMLQ9H3Y0 253 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 EFCC1Q9HA90 598 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 GABBR1Q9UBS5 961 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
SHMT2-233ENST00000557529 ITIH6Q6UXX5 1313 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 UTRNP46939 3433 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 PDXKO00764 312 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 CALUO43852 315 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 HIP1RO75146 1068 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 ATG7O95352 703 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 GCNT3O95395 438 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 MAPTP10636 758 aaKnown RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 PBX1P40424 430 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF157P51786 506 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 SP2Q02086 613 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 ALCAMQ13740 583 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 KNOP1Q1ED39 458 aaKnown RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 FAM110CQ1W6H9 321 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 CYFIP1Q7L576 1253 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 RASAL3Q86YV0 1011 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 DRC1Q96MC2 740 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 FGFBP2Q9BYJ0 223 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 VPS16Q9H269 839 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
SHMT2-233ENST00000557529 LARSQ9P2J5 1176 aaKnown RBP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.2
SHMT2-233ENST00000557529 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 KIAA1217Q5T5P2 1943 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 BACH1O14867 736 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 TEX33O43247 280 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
SHMT2-233ENST00000557529 TPM1P09493 284 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 MAPK4P31152 587 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 CLCN1P35523 988 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 DNM2P50570 870 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 LRMPQ12912 555 aa13.78□□□□□ -0.2
SHMT2-233ENST00000557529 TRIM14Q14142 442 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms