RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CTSHP09668 335 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 CCNYL3P0C7X3 344 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 HSPD1P10809 573 aaKnown RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 IRS1P35568 1242 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SP2Q02086 613 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SF3A1Q15459 793 aaKnown RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SMAD2Q15796 467 aaKnown RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 CLUL1Q15846 466 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 QRICH1Q2TAL8 776 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 HSDL1Q3SXM5 330 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 MFSD6Q6ZSS7 791 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 RPAINQ86UA6 219 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 ZNF589Q86UQ0 364 aaPredicted RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 ADGRF4Q8IZF3 695 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 CRIPAKQ8N1N5 446 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 ATP6V0A1Q93050 837 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 TOP1MTQ969P6 601 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 ZNF775Q96BV0 537 aaPredicted RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SNX27Q96L92 541 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 SPATA33Q96N06 139 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 TTC14Q96N46 770 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 ZKSCAN3Q9BRR0 538 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 C16orf70Q9BSU1 422 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 IFIH1Q9BYX4 1025 aaKnown RBP6.81□□□□□ -1.32
VPS33B-207ENST00000557470 PXMP2Q9NR77 195 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 HELLSQ9NRZ9 838 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 MUTYHQ9UIF7 546 aa6.81□□□□□ -1.32
VPS33B-207ENST00000557470 C17orf102A2RUQ5 167 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 OPLAHO14841 1288 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 SPTLC1O15269 473 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 TREHO43280 583 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 TECTAO75443 2155 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 GGPS1O95749 300 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 CFBP00751 764 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 LINC00271P0C7V0 271 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 SMIM10L2AP0DMW4 78 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 SMIM10L2BP0DMW5 78 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 MYCLP12524 364 aaPredicted RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 UBA1P22314 1058 aaKnown RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 HOXC8P31273 242 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 CTNNB1P35222 781 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 GTF2F1P35269 517 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 HSD17B4P51659 736 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 WNT7BP56706 349 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 DLX2Q07687 328 aaPredicted RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 HYAL1Q12794 435 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 PTPRNQ16849 979 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 MCMDC2Q4G0Z9 681 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 HERC4Q5GLZ8 1057 aaPredicted RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 CELF3Q5SZQ8 465 aaKnown RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 DGKHQ86XP1 1220 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 PNMA1Q8ND90 353 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 PRSS33Q8NF86 280 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 IL31RAQ8NI17 732 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 SEPT8Q92599 483 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 ESR2Q92731 530 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 EVI5LQ96CN4 794 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 PDCD2LQ9BRP1 358 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 UPF3BQ9BZI7 483 aaKnown RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 MRPL11Q9Y3B7 192 aaKnown RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 ZFHX2Q9C0A1 2572 aaPredicted RBP6.8□□□□□ -1.32
VPS33B-207ENST00000557470 ZDBF2Q9HCK1 2354 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 ATG2AQ2TAZ0 1938 aa6.8□□□□□ -1.32
VPS33B-207ENST00000557470 NLRC5Q86WI3 1866 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 C5orf67F2Z3F1 127 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 H3BRB1 525 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 AXIN1O15169 862 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 GRM6O15303 877 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 MBTPS2O43462 519 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 NCK2O43639 380 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 DHX16O60231 1041 aaKnown RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 PPP1R11O60927 126 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 TBX10O75333 385 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 CSPG5O95196 566 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 LGALS2P05162 132 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 PCP11498 1178 aaKnown RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 HOXA13P31271 388 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 NMIQ13287 307 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 PGM5Q15124 567 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 ASPRV1Q53RT3 343 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 FIBCD1Q8N539 461 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 APBB2Q92870 758 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 IL17RAQ96F46 866 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 POP1Q99575 1024 aaKnown RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 RNPEPQ9H4A4 650 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 RNF41Q9H4P4 317 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 TUT1Q9H6E5 874 aaKnown RBP6.79□□□□□ -1.32
VPS33B-207ENST00000557470 BCAS3Q9H6U6 928 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 KAT14Q9H8E8 782 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 JMJD4Q9H9V9 463 aa6.79□□□□□ -1.32
VPS33B-207ENST00000557470 RC3H2Q9HBD1 1191 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms