RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PHLDB3Q6NSJ2 640 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 BTNL9Q6UXG8 535 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 SYTL5Q8TDW5 730 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 DCAF4Q8WV16 495 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 TBC1D5Q92609 795 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 IL1RAPL2Q9NP60 686 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 TNNQ9UQP3 1299 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
NEDD1-211ENST00000557454 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-211ENST00000557454 MYH7BA7E2Y1 1941 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 LAMTOR5O43504 91 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 NMT2O60551 498 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 ADAM17P78536 824 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 TMC7Q7Z402 723 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 ZBTB44Q8NCP5 570 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 PJA1Q8NG27 643 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 GPR152Q8TDT2 470 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 STRBPQ96SI9 672 aaKnown RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 RMDN3Q96TC7 470 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 TYW1Q9NV66 732 aaKnown RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 IGSF9Q9P2J2 1179 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
NEDD1-211ENST00000557454 FBXO4Q9UKT5 387 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 EXOC6BQ9Y2D4 811 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 CDY2AQ9Y6F7 541 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
NEDD1-211ENST00000557454 LAMA5O15230 3695 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
NEDD1-211ENST00000557454 TBC1D4O60343 1298 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 GDF9O60383 454 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 LILRB5O75023 590 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
NEDD1-211ENST00000557454 UBA1P22314 1058 aaKnown RBP11.03□□□□□ -0.64
NEDD1-211ENST00000557454 TDO2P48775 406 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 PLCB3Q01970 1234 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 LPAL2Q16609 132 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 GPR20Q99678 358 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 DZANK1Q9NVP4 752 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 ZSCAN32Q9NX65 697 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
NEDD1-211ENST00000557454 DENND4AQ7Z401 1863 aa11.02□□□□□ -0.64
NEDD1-211ENST00000557454 KIAA1217Q5T5P2 1943 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.65
NEDD1-211ENST00000557454 CYSRT1A8MQ03 144 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 TAF4O00268 1085 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 NR3C2P08235 984 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 SRFP11831 508 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 EPCAMP16422 314 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 LAG3P18627 525 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 NCLP19338 710 aaKnown RBP11.02□□□□□ -0.65
NEDD1-211ENST00000557454 CA8P35219 290 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 PBX3P40426 434 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 SP2Q02086 613 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 SLFN5Q08AF3 891 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 SMC1AQ14683 1233 aaKnown RBP11.02□□□□□ -0.65
NEDD1-211ENST00000557454 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 TAF2Q6P1X5 1199 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 DDX1Q92499 740 aaKnown RBP11.02□□□□□ -0.65
NEDD1-211ENST00000557454 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 CWH43Q9H720 699 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 IL17RBQ9NRM6 502 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
NEDD1-211ENST00000557454 N4BP1O75113 896 aaKnown RBP11.01□□□□□ -0.65
NEDD1-211ENST00000557454 TRIM27P14373 513 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 FAM102BQ5T8I3 360 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 RSPH3Q86UC2 560 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 MRPL43Q8N983 215 aaKnown RBP11.01□□□□□ -0.65
NEDD1-211ENST00000557454 ARHGAP45Q92619 1136 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
NEDD1-211ENST00000557454 BCL11AQ9H165 835 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 BCAS3Q9H6U6 928 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 MLXIPQ9HAP2 919 aa11.01□□□□□ -0.65
NEDD1-211ENST00000557454 ITPR1Q14643 2758 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 DMXL2Q8TDJ6 3036 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 NOP56O00567 594 aaKnown RBP11□□□□□ -0.65
NEDD1-211ENST00000557454 PDE4AP27815 886 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 SARSP49591 514 aaKnown RBP11□□□□□ -0.65
NEDD1-211ENST00000557454 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms