RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 NECTIN1Q15223 517 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 CYP2W1Q8TAV3 490 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 TRAPPC12Q8WVT3 735 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 PPP2R3CQ969Q6 453 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 RIC8AQ9NPQ8 531 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 RALGAPA2Q2PPJ7 1873 aa19.53■□□□□ 0.72
NEDD1-210ENST00000557400 CNTNAP5Q8WYK1 1306 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 SMIM35A0A1B0GVV1 85 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 FOSP01100 380 aaPredicted RBP19.52■□□□□ 0.72
NEDD1-210ENST00000557400 ARP10275 920 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 SCG2P13521 617 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 GTF2F1P35269 517 aaKnown RBP eCLIP19.52■□□□□ 0.72
NEDD1-210ENST00000557400 NAPAP54920 295 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 CEP55Q53EZ4 464 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 PPP1R18Q6NYC8 613 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 APOA5Q6Q788 366 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 CELF4Q9BZC1 486 aaKnown RBP19.52■□□□□ 0.72
NEDD1-210ENST00000557400 RBM28Q9NW13 759 aaKnown RBP19.52■□□□□ 0.72
NEDD1-210ENST00000557400 CD207Q9UJ71 328 aa19.52■□□□□ 0.72
NEDD1-210ENST00000557400 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 LINC01565O15544 149 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ITGB1P05556 798 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 SLC26A2P50443 739 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 KRT76Q01546 638 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ITGB3BPQ13352 177 aaPredicted RBP19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ADAM15Q13444 863 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 PAN2Q504Q3 1202 aaKnown RBP19.51■□□□□ 0.71
NEDD1-210ENST00000557400 TYW1BQ6NUM6 668 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 NME8Q8N427 588 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ANO3Q9BYT9 981 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 AGO4Q9HCK5 861 aaKnown RBP19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ANO2Q9NQ90 1003 aa19.51■□□□□ 0.71
NEDD1-210ENST00000557400 ATG7O95352 703 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 DNAJB1P25685 340 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 NDUFV1P49821 464 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 ADCY7P51828 1080 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 KLHL23Q8NBE8 558 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 SPPL3Q8TCT6 385 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 LRFN2Q9ULH4 789 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 NLRC5Q86WI3 1866 aa19.5■□□□□ 0.71
NEDD1-210ENST00000557400 hCG_1984214I3L0E3 225 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 MEIS1O00470 390 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 SREBF1P36956 1147 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
NEDD1-210ENST00000557400 FUT2Q10981 343 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 AP3B2Q13367 1082 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 RTN1Q16799 776 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 TMEM266Q2M3C6 531 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 FAM43BQ6ZT52 329 aaPredicted RBP19.49■□□□□ 0.71
NEDD1-210ENST00000557400 ZNF713Q8N859 430 aaPredicted RBP19.49■□□□□ 0.71
NEDD1-210ENST00000557400 POF1BQ8WVV4 589 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 MSLNLQ96KJ4 702 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 TMX1Q9H3N1 280 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 TTC3P53804 2025 aa19.49■□□□□ 0.71
NEDD1-210ENST00000557400 IGKV6D-21A0A0A0MT36 114 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 STXBP3O00186 592 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 BACH1O14867 736 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 HBP1O60381 514 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 CCNE2O96020 404 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 KLRC1P26715 233 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 SARSP49591 514 aaKnown RBP19.48■□□□□ 0.71
NEDD1-210ENST00000557400 GATMP50440 423 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 NFX1Q12986 1120 aaKnown RBP19.48■□□□□ 0.71
NEDD1-210ENST00000557400 HERC4Q5GLZ8 1057 aaPredicted RBP19.48■□□□□ 0.71
NEDD1-210ENST00000557400 RNF20Q5VTR2 975 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 NIPA1Q7RTP0 329 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 ADGRD2Q7Z7M1 963 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 EFHBQ8N7U6 833 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 ATP8B4Q8TF62 1192 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 GLT8D2Q9H1C3 349 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 BARHL2Q9NY43 387 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 GINS2Q9Y248 185 aa19.48■□□□□ 0.71
NEDD1-210ENST00000557400 V9GY48 417 aaPredicted RBP19.48■□□□□ 0.71
NEDD1-210ENST00000557400 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 ZBTB43O43298 467 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 EYA4O95677 639 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 ZNF76P36508 570 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 FAM160B1Q5W0V3 765 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 ABHD15Q6UXT9 468 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 NEK1Q96PY6 1258 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 KCNH6Q9H252 994 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 ERVK-5Q9HDB9 667 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 MUTYHQ9UIF7 546 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
NEDD1-210ENST00000557400 MYO7AQ13402 2215 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 DDX39AO00148 427 aaKnown RBP19.46■□□□□ 0.71
NEDD1-210ENST00000557400 RPS6KA5O75582 802 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 CLK2P49760 499 aaKnown RBP19.46■□□□□ 0.71
NEDD1-210ENST00000557400 HFE2Q6ZVN8 426 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 RNF135Q8IUD6 432 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 CCDC60Q8IWA6 550 aaPredicted RBP19.46■□□□□ 0.71
NEDD1-210ENST00000557400 KIAA0319LQ8IZA0 1049 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 SMRP1Q8NCR6 262 aa19.46■□□□□ 0.71
NEDD1-210ENST00000557400 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
NEDD1-210ENST00000557400 TMEM260Q9NX78 707 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms