RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TBX3O15119 743 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 CXCL10P02778 98 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 RPAINQ86UA6 219 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 CCDC60Q8IWA6 550 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-206ENST00000557358 NME8Q8N427 588 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 APBB2Q92870 758 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 KIF2CQ99661 725 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 SLC28A3Q9HAS3 691 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 CXXC1Q9P0U4 656 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-206ENST00000557358 PCDHA2Q9Y5H9 948 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 MAFBQ9Y5Q3 323 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-206ENST00000557358 MYO9BQ13459 2157 aa15.57■□□□□ 0.08
VPS33B-206ENST00000557358 LAMA3Q16787 3333 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 NBNO60934 754 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 TMOD1P28289 359 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 ADAM17P78536 824 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 HIC1Q14526 733 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 ODR4Q5SWX8 454 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 OXER1Q8TDS5 423 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 MBOAT7Q96N66 472 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 FAM49AQ9H0Q0 323 aaPredicted RBP15.56■□□□□ 0.08
VPS33B-206ENST00000557358 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 PCDHA11Q9Y5I1 949 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 TET1Q8NFU7 2136 aa15.56■□□□□ 0.08
VPS33B-206ENST00000557358 BTBD18B2RXH4 712 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 MAGEB2O15479 319 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 PSMD10O75832 226 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 AMHP03971 560 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 KLRC1P26715 233 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 MRPS6P82932 125 aaKnown RBP15.55■□□□□ 0.08
VPS33B-206ENST00000557358 NR5A1Q13285 461 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 FAM26DQ5JW98 314 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 MTHFD1LQ6UB35 978 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 TRMT1LQ7Z2T5 733 aaKnown RBP15.55■□□□□ 0.08
VPS33B-206ENST00000557358 ZNF710Q8N1W2 664 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 USP38Q8NB14 1042 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 ETNPPLQ8TBG4 499 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 DNAJB3Q8WWF6 145 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 WNT8BQ93098 351 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 PBX4Q9BYU1 374 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-206ENST00000557358 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
VPS33B-206ENST00000557358 NOL7Q9UMY1 257 aaKnown RBP15.55■□□□□ 0.08
VPS33B-206ENST00000557358 IGSF9BQ9UPX0 1349 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 SMIM35A0A1B0GVV1 85 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 OATP04181 439 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 GUCY1B3Q02153 619 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 RUFY4Q6ZNE9 571 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
VPS33B-206ENST00000557358 Q7L0L9 218 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 METTL13Q8N6R0 699 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 IFIH1Q9BYX4 1025 aaKnown RBP15.54■□□□□ 0.08
VPS33B-206ENST00000557358 SEMA6BQ9H3T3 888 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 ZNF576Q9H609 170 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 MTMR10Q9NXD2 777 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.54■□□□□ 0.08
VPS33B-206ENST00000557358 TRPV2Q9Y5S1 764 aa15.54■□□□□ 0.08
VPS33B-206ENST00000557358 GRXCR1A8MXD5 290 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 SLC37A4O43826 429 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 TLL1O43897 1013 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 NEMFO60524 1076 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 DTNBO60941 627 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 WDR5P61964 334 aaKnown RBP15.53■□□□□ 0.08
VPS33B-206ENST00000557358 PSMC5P62195 406 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 PRKCEQ02156 737 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 CALCRLQ16602 461 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 PLEKHG4Q58EX7 1191 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 MARCH8Q5T0T0 291 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 EXOC8Q8IYI6 725 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 FBXO18Q8NFZ0 1043 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 JPH2Q9BR39 696 aaPredicted RBP15.53■□□□□ 0.08
VPS33B-206ENST00000557358 KCNMB3Q9NPA1 279 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 CDY2AQ9Y6F7 541 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
VPS33B-206ENST00000557358 EVPLQ92817 2033 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 H3BQV1 296 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 P4HBP07237 508 aaKnown RBP15.52■□□□□ 0.08
VPS33B-206ENST00000557358 GHRP10912 638 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 ATP2B1P20020 1258 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 DNM2P50570 870 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 ST3GAL1Q11201 340 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 PPP2R5CQ13362 524 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 ORC2Q13416 577 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-206ENST00000557358 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 TRAF7Q6Q0C0 670 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 TSHZ1Q6ZSZ6 1077 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 HERC6Q8IVU3 1022 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 TRAPPC12Q8WVT3 735 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 TMX3Q96JJ7 454 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 GAS2L1Q99501 681 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-206ENST00000557358 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-206ENST00000557358 SEPT9Q9UHD8 586 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-206ENST00000557358 PCDHA12Q9UN75 941 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms