RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 IGKV6D-21A0A0A0MT36 114 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 POTEB3A0JP26 581 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 BACH1O14867 736 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
SNX6-210ENST00000557341 ATG7O95352 703 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 CYP3A4P08684 503 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 BMP1P13497 986 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 POTEBQ6S5H4 581 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 BICD2Q8TD16 824 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 TRAPPC12Q8WVT3 735 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 ZBTB10Q96DT7 871 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 TRPV2Q9Y5S1 764 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 SQORQ9Y6N5 450 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 ADGRA3Q8IWK6 1321 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 COL1A2P08123 1366 aa16.11■□□□□ 0.17
SNX6-210ENST00000557341 IPO5O00410 1097 aaKnown RBP16.1■□□□□ 0.17
SNX6-210ENST00000557341 CCNE2O96020 404 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 IFNAR1P17181 557 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 NTRK3Q16288 839 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 CCDC60Q8IWA6 550 aaPredicted RBP16.1■□□□□ 0.17
SNX6-210ENST00000557341 MRPL38Q96DV4 380 aaKnown RBP16.1■□□□□ 0.17
SNX6-210ENST00000557341 IL17RAQ96F46 866 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 ZNF577Q9BSK1 485 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
SNX6-210ENST00000557341 SMIM35A0A1B0GVV1 85 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 HBP1O60381 514 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 EVCP57679 992 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 PTPROQ16827 1216 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 MIS18BP1Q6P0N0 1132 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 ABHD15Q6UXT9 468 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 TMEM192Q8IY95 271 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 FTHL17Q9BXU8 183 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 ZNF302Q9NR11 478 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 TBC1D22BQ9NU19 505 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
SNX6-210ENST00000557341 H3BNC9 293 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 ADAMTS3O15072 1205 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 DHX15O43143 795 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 NEFLP07196 543 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 PDIA3P30101 505 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 CD52P31358 61 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 KRT76Q01546 638 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 PAK2Q13177 524 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 GPM6BQ13491 265 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 SMAP1Q8IYB5 467 aaPredicted RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 NME8Q8N427 588 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 FIBCD1Q8N539 461 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 RASGRP4Q8TDF6 673 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 NECAB3Q96P71 396 aaPredicted RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 AGO3Q9H9G7 860 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 RC3H2Q9HBD1 1191 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 NCOA5Q9HCD5 579 aaKnown RBP16.08■□□□□ 0.16
SNX6-210ENST00000557341 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 RWDD3Q9Y3V2 267 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 KDM3AQ9Y4C1 1321 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 ARID2Q68CP9 1835 aa16.08■□□□□ 0.16
SNX6-210ENST00000557341 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 CTNNB1P35222 781 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
SNX6-210ENST00000557341 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
SNX6-210ENST00000557341 PRR16Q569H4 304 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 LINC01599Q8WXQ3 324 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 UBE2ZQ9H832 354 aaPredicted RBP16.07■□□□□ 0.16
SNX6-210ENST00000557341 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 CYP46A1Q9Y6A2 500 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
SNX6-210ENST00000557341 ENPP3O14638 875 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 PSAPP07602 524 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 KLRC1P26715 233 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 CIITAP33076 1130 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 ZNF484Q5JVG2 852 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
SNX6-210ENST00000557341 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
SNX6-210ENST00000557341 PADI3Q9ULW8 664 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 C5orf42Q9H799 3197 aa16.06■□□□□ 0.16
SNX6-210ENST00000557341 C5orf67F2Z3F1 127 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 CPLX1O14810 134 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 DGKIO75912 1065 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
SNX6-210ENST00000557341 NPAS4Q8IUM7 802 aa16.05■□□□□ 0.16
SNX6-210ENST00000557341 BANK1Q8NDB2 785 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms