RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 TRPV2Q9Y5S1 764 aa16.47■□□□□ 0.23
VRTN-202ENST00000557177 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 IGKV6D-21A0A0A0MT36 114 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 MEIS1O00470 390 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
VRTN-202ENST00000557177 SREBF1P36956 1147 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 CLK2P49760 499 aaKnown RBP16.46■□□□□ 0.23
VRTN-202ENST00000557177 STAT5BP51692 787 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 ADCY7P51828 1080 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 CAMK1Q14012 370 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 RTN1Q16799 776 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 NPAS4Q8IUM7 802 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
VRTN-202ENST00000557177 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
VRTN-202ENST00000557177 P2RX5Q93086 422 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
VRTN-202ENST00000557177 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
VRTN-202ENST00000557177 WDFY4Q6ZS81 3184 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 SMIM35A0A1B0GVV1 85 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 M0QZ92 97 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 ZBTB43O43298 467 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 ALADP13716 330 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 SLC26A2P50443 739 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 DLX2Q07687 328 aaPredicted RBP16.45■□□□□ 0.22
VRTN-202ENST00000557177 PAK2Q13177 524 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 AP3B2Q13367 1082 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 ADHFE1Q8IWW8 467 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 TCEANC2Q96MN5 208 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 CELF4Q9BZC1 486 aaKnown RBP16.45■□□□□ 0.22
VRTN-202ENST00000557177 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
VRTN-202ENST00000557177 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
VRTN-202ENST00000557177 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
VRTN-202ENST00000557177 SMCO2A6NFE2 343 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 CCNE2O96020 404 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
VRTN-202ENST00000557177 SMAD2Q15796 467 aaKnown RBP16.44■□□□□ 0.22
VRTN-202ENST00000557177 ADCK5Q3MIX3 580 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 NAALADL2Q58DX5 795 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 ABHD15Q6UXT9 468 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
VRTN-202ENST00000557177 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 NME8Q8N427 588 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
VRTN-202ENST00000557177 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
VRTN-202ENST00000557177 DCXO43602 365 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 TBX10O75333 385 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 ITGB1P05556 798 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 SCG2P13521 617 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 DNAJB1P25685 340 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 CDC27P30260 824 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 RCAN1P53805 252 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 KRT76Q01546 638 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 SPPL3Q8TCT6 385 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 ATP8B4Q8TF62 1192 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 CRYGNQ8WXF5 182 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 PLXNA4Q9HCM2 1894 aa16.43■□□□□ 0.22
VRTN-202ENST00000557177 COL1A2P08123 1366 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 FNDC1Q4ZHG4 1894 aaPredicted RBP16.42■□□□□ 0.22
VRTN-202ENST00000557177 IGLV3-22A0A075B6J6 115 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 FAM86B1E9PN63 330 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 LINC01565O15544 149 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
VRTN-202ENST00000557177 MBTPS2O43462 519 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 HBP1O60381 514 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 FAM86B2P0C5J1 330 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 STAG3L1P0CL83 205 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 KLRC1P26715 233 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 ADAM15Q13444 863 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
VRTN-202ENST00000557177 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
VRTN-202ENST00000557177 ERVK-5Q9HDB9 667 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
VRTN-202ENST00000557177 KLF18A0A0U1RQI7 1052 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 ZBTB42B2RXF5 422 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
VRTN-202ENST00000557177 MGEA5O60502 916 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 CYP3A4P08684 503 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 IRS1P35568 1242 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 SARSP49591 514 aaKnown RBP16.41■□□□□ 0.22
VRTN-202ENST00000557177 GATMP50440 423 aa16.41■□□□□ 0.22
VRTN-202ENST00000557177 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
VRTN-202ENST00000557177 CLUL1Q15846 466 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms