RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 COL1A2P08123 1366 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 A0A1W2PPC1 479 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 VPS37CA5D8V6 355 aaPredicted RBP27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 IQCF3P0C7M6 154 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 SYT1P21579 422 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 TXKP42681 527 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 EPHB4P54760 987 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 NBR1Q14596 966 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 RILPL1Q5EBL4 403 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 SCLYQ96I15 445 aa27.64■■■□□ 2.02
SDR39U1-221ENST00000556707 SELPP16109 830 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 PRKCEQ02156 737 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 ZNF484Q5JVG2 852 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 NCAPH2Q6IBW4 605 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 TAF2Q6P1X5 1199 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 TRAPPC12Q8WVT3 735 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 PCDHB6Q9Y5E3 794 aa27.63■■■□□ 2.01
SDR39U1-221ENST00000556707 OATP04181 439 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 HSP90AA1P07900 732 aaKnown RBP27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 OR52Z1P0C646 297 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 THPOP40225 353 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 EPHA7Q15375 998 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 LRRC8DQ7L1W4 858 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 TRMT1LQ7Z2T5 733 aaKnown RBP27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 BRAPQ7Z569 592 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 TDHQ8IZJ6 230 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 C4orf32Q8N8J7 132 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 IL23AQ9NPF7 189 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 NRBP2Q9NSY0 501 aa27.62■■■□□ 2.01
SDR39U1-221ENST00000556707 LOXHD1Q8IVV2 1947 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 ZBTB42B2RXF5 422 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 CAND2O75155 1236 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 RFC2P35250 354 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 PSMC5P62195 406 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 ZNF618Q5T7W0 954 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 RUFY4Q6ZNE9 571 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 BANK1Q8NDB2 785 aa27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.61■■■□□ 2.01
SDR39U1-221ENST00000556707 P4HBP07237 508 aaKnown RBP27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 QARSP47897 775 aaKnown RBP27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 TRAF7Q6Q0C0 670 aa27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 C16orf59Q7L2K0 433 aa27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 RPAINQ86UA6 219 aa27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 RPUSD2Q8IZ73 545 aaKnown RBP27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 CEP131Q9UPN4 1083 aa27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 PCDHA2Q9Y5H9 948 aa27.6■■■□□ 2.01
SDR39U1-221ENST00000556707 PARNO95453 639 aaKnown RBP27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 ACRP10323 421 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 KLRC1P26715 233 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 PTGDRQ13258 359 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 XKR3Q5GH77 459 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 C9orf50Q5SZB4 431 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 MTHFD1LQ6UB35 978 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 FERMT3Q86UX7 667 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 VWCEQ96DN2 955 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 ZBTB10Q96DT7 871 aa27.59■■■□□ 2.01
SDR39U1-221ENST00000556707 DKC1O60832 514 aaKnown RBP eCLIP27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 STBD1O95210 358 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 SHHQ15465 462 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 HABP4Q5JVS0 413 aaKnown RBP27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 TMEM240Q5SV17 173 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 PSRC1Q6PGN9 363 aaPredicted RBP27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 RSPH3Q86UC2 560 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.58■■■□□ 2.012e-12■□□□□ 9.2
SDR39U1-221ENST00000556707 RGL1Q9NZL6 768 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
SDR39U1-221ENST00000556707 SIP14410 1827 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 POTEMA6NI47 508 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 RSPH10B2B2RC85 870 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 LAD1O00515 517 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 STX6O43752 255 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 RPLP2P05387 115 aaKnown RBP27.57■■■□□ 2
SDR39U1-221ENST00000556707 PFKMP08237 780 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 RSPH10BP0C881 870 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 ZNF365Q70YC5 407 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 DEFB128Q7Z7B8 93 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 DNAJB3Q8WWF6 145 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 DYDC2Q96IM9 177 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 EIF2AK1Q9BQI3 630 aaKnown RBP27.57■■■□□ 2
SDR39U1-221ENST00000556707 LXNQ9BS40 222 aa27.57■■■□□ 2
SDR39U1-221ENST00000556707 NIFKQ9BYG3 293 aaKnown RBP27.57■■■□□ 2
SDR39U1-221ENST00000556707 SMIM35A0A1B0GVV1 85 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 C22orf31O95567 290 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 TECP42680 631 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 GPNMBQ14956 572 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 C4orf19Q8IY42 314 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 NEK9Q8TD19 979 aa27.56■■■□□ 2
SDR39U1-221ENST00000556707 FAM49AQ9H0Q0 323 aaPredicted RBP27.56■■■□□ 2
SDR39U1-221ENST00000556707 WRAP73Q9P2S5 460 aaPredicted RBP27.56■■■□□ 2
SDR39U1-221ENST00000556707 SEPT9Q9UHD8 586 aaPredicted RBP27.56■■■□□ 2
SDR39U1-221ENST00000556707 ARID2Q68CP9 1835 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 DDX11L8A8MPP1 907 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 MAGEB2O15479 319 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 CTSHP09668 335 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 CYP4A11Q02928 519 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 RESTQ13127 1097 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 MBTPS1Q14703 1052 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 TARBP2Q15633 366 aaKnown RBP27.55■■■□□ 2
SDR39U1-221ENST00000556707 TMEM266Q2M3C6 531 aa27.55■■■□□ 2
SDR39U1-221ENST00000556707 FAM26DQ5JW98 314 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms