RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MYO1AQ9UBC5 1043 aa11.16□□□□□ -0.62
TMEM260-211ENST00000556648 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 GNA14O95837 355 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 VAV2P52735 878 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 MRPS9P82933 396 aaKnown RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 KCNH2Q12809 1159 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 SPP2Q13103 211 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 EPHA7Q15375 998 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 TKFCQ3LXA3 575 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 DPY19L2P1Q6NXN4 242 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 ZNF662Q6ZS27 426 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 LPAR1Q92633 364 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 ZKSCAN4Q969J2 545 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 IQCDQ96DY2 449 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 PRDM10Q9NQV6 1147 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 CEP72Q9P209 647 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 AJAP1Q9UKB5 411 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-211ENST00000556648 PPP1R9AQ9ULJ8 1098 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.62
TMEM260-211ENST00000556648 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.63
TMEM260-211ENST00000556648 TMEM150BA6NC51 233 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 FZD9O00144 591 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 DHX15O43143 795 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 CALUO43852 315 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 GFPT1Q06210 699 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 MAPK7Q13164 816 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 ASTE1Q2TB18 679 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 TRAPPC11Q7Z392 1133 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 TEX2Q8IWB9 1127 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 NLGN2Q8NFZ4 835 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 RLFQ13129 1914 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 PDXKO00764 312 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 MOCS3O95396 460 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 GAP43P17677 238 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 SLC9A1P19634 815 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 RPS6P62753 249 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 UGCGQ16739 394 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 ANGEL2Q5VTE6 544 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 MAEAQ7L5Y9 396 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 MIER3Q7Z3K6 550 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 DAW1Q8N136 415 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 NOA1Q8NC60 698 aaKnown RBP11.14□□□□□ -0.63
TMEM260-211ENST00000556648 RABGGTAQ92696 567 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 PARD6BQ9BYG5 372 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 OGFRQ9NZT2 677 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 RIPK3Q9Y572 518 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
TMEM260-211ENST00000556648 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 KRT86O43790 486 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 AKR1B10O60218 316 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 HIP1RO75146 1068 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ZRANB2O95218 330 aaKnown RBP eCLIP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 LCA5LO95447 670 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 EPS15P42566 896 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 GHRHRQ02643 423 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ARID5AQ03989 594 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 RAPGEF1Q13905 1077 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 PGM5Q15124 567 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 SPA17Q15506 151 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 SFMBT2Q5VUG0 894 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 CEP112Q8N8E3 955 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 PNKPQ96T60 521 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 RIT2Q99578 217 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 FAM53CQ9NYF3 392 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-211ENST00000556648 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 LTBP3Q9NS15 1303 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 MYH11P35749 1972 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 ARHGEF35A5YM69 484 aa11.13□□□□□ -0.63
TMEM260-211ENST00000556648 VWA5AO00534 786 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms