RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 LGR5O75473 907 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 CAVIN2O95810 425 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 CYBAP13498 195 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 PRKCEQ02156 737 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 PKN2Q16513 984 aaKnown RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 NAALADL2Q58DX5 795 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 XKR9Q5GH70 373 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 TLK2Q86UE8 772 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 GPBP1Q86WP2 473 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 TRIML1Q8N9V2 468 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 AFG1LQ8WV93 481 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 KATNAL1Q9BW62 490 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 NAT10Q9H0A0 1025 aaKnown RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 HMX1Q9NP08 348 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-218ENST00000556343 BLOC1S4Q9NUP1 217 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 ANO10Q9NW15 660 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 TSKSQ9UJT2 592 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
ACTN1-218ENST00000556343 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 SYCE3A1L190 88 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 A6NJR5 290 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 HBP1O60381 514 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 TBCAO75347 108 aaKnown RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 DGAT1O75907 488 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 KIF20AO95235 890 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 OATP04181 439 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 MMP3P08254 477 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 ELNP15502 786 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 GAP43P17677 238 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PPP1R2P41236 205 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 SLC12A3P55017 1021 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 ZNF445P59923 1031 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 ASIC1P78348 528 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PSMD2Q13200 908 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PNOCQ13519 176 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 STIM1Q13586 685 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 KCNB1Q14721 858 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 ECM1Q16610 540 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 FSCN1Q16658 493 aaKnown RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 ZNF484Q5JVG2 852 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 CNNM4Q6P4Q7 775 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 LRSAM1Q6UWE0 723 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 RBM43Q6ZSC3 357 aaKnown RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 CTU1Q7Z7A3 348 aaKnown RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PIGOQ8TEQ8 1089 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 DDX12PQ92771 950 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 NIFKQ9BYG3 293 aaKnown RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 EXOC1Q9NV70 894 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-218ENST00000556343 PCDHA5Q9Y5H7 936 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 COL4A3BPQ9Y5P4 624 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 IGSF9BQ9UPX0 1349 aa10.25□□□□□ -0.77
ACTN1-218ENST00000556343 GAS2O43903 313 aaKnown RBP10.24□□□□□ -0.77
ACTN1-218ENST00000556343 RPN1P04843 607 aaKnown RBP10.24□□□□□ -0.77
ACTN1-218ENST00000556343 INHAP05111 366 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 LGALS2P05162 132 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 IDEP14735 1019 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 RFC5P40937 340 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 RARRES1P49788 294 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 GJA9P57773 515 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 PSMC6P62333 389 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 DPYDQ12882 1025 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 CUL4BQ13620 913 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 STX1AQ16623 288 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 CT47A1Q5JQC4 288 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-218ENST00000556343 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 MAP3K21Q5TCX8 1036 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 NT5DC1Q5TFE4 455 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 RINT1Q6NUQ1 792 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 STXBP4Q6ZWJ1 553 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 UNC13DQ70J99 1090 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 KCNK18Q7Z418 384 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 RNF180Q86T96 592 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 PCSK9Q8NBP7 692 aaKnown RBP10.24□□□□□ -0.77
ACTN1-218ENST00000556343 SLC17A8Q8NDX2 589 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 MCPH1Q8NEM0 835 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 ATP8B4Q8TF62 1192 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 STAMQ92783 540 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 TRIM9Q9C026 710 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 BLZF1Q9H2G9 400 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 CYP26B1Q9NR63 512 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 DDX20Q9UHI6 824 aaKnown RBP10.24□□□□□ -0.77
ACTN1-218ENST00000556343 TUBE1Q9UJT0 475 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
ACTN1-218ENST00000556343 MYMKA6NI61 221 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 RRN3P2A6NIE6 340 aa10.23□□□□□ -0.77
ACTN1-218ENST00000556343 H3BRB1 525 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms