RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-221ENST00000556342 SENP2Q9HC62 589 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 RWDD3Q9Y3V2 267 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 ADGRA3Q8IWK6 1321 aa12.36□□□□□ -0.43
SYNE2-221ENST00000556342 IFIT3O14879 490 aaKnown RBP12.35□□□□□ -0.43
SYNE2-221ENST00000556342 GRM6O15303 877 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 IRS1P35568 1242 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 SP4Q02446 784 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 TROAPQ12815 778 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 TRDNQ13061 729 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 AAMPQ13685 434 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 CLP1Q92989 425 aaKnown RBP12.35□□□□□ -0.43
SYNE2-221ENST00000556342 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
SYNE2-221ENST00000556342 KCNH6Q9H252 994 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
SYNE2-221ENST00000556342 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
SYNE2-221ENST00000556342 PCDHB3Q9Y5E6 796 aa12.35□□□□□ -0.43
SYNE2-221ENST00000556342 C5orf42Q9H799 3197 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 TRIOO75962 3097 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 ERICH2A1L162 156 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 IGHDP01880 384 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 NHLH1Q02575 133 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-221ENST00000556342 MGAT3Q09327 533 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 SMAD2Q15796 467 aaKnown RBP12.34□□□□□ -0.43
SYNE2-221ENST00000556342 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 XRRA1Q6P2D8 792 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 NLRP7Q8WX94 980 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
SYNE2-221ENST00000556342 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
SYNE2-221ENST00000556342 ENPP3O14638 875 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 MBTPS2O43462 519 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 CYP21A2P08686 494 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-221ENST00000556342 MRE11P49959 708 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 PPFIA1Q13136 1202 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 SMAD4Q13485 552 aaKnown RBP12.33□□□□□ -0.44
SYNE2-221ENST00000556342 LPIN1Q14693 890 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 WTAPQ15007 396 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 CLUL1Q15846 466 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 HFE2Q6ZVN8 426 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 RSPH3Q86UC2 560 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-221ENST00000556342 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 PIBF1Q8WXW3 757 aa12.33□□□□□ -0.44
SYNE2-221ENST00000556342 ZNF689Q96CS4 500 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-221ENST00000556342 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
SYNE2-221ENST00000556342 RALGAPA2Q2PPJ7 1873 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 MEIS2O14770 477 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 TBX10O75333 385 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 ZMYND10O75800 440 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 CSPG5O95196 566 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 MMP1P03956 469 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 COPS2P61201 443 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 BTG3Q14201 252 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 GRIK4Q16099 956 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 HERC4Q5GLZ8 1057 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 FBXO47Q5MNV8 452 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 TSHZ1Q6ZSZ6 1077 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 CATIPQ7Z7H3 387 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 CUL5Q93034 780 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 PLVAPQ9BX97 442 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
SYNE2-221ENST00000556342 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 MUTYHQ9UIF7 546 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 TAF6LQ9Y6J9 622 aa12.32□□□□□ -0.44
SYNE2-221ENST00000556342 NLRC5Q86WI3 1866 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 ZNF318Q5VUA4 2279 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 LINC01565O15544 149 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 ATP9AO75110 1047 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 DGKIO75912 1065 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 KCNA2P16389 499 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 MARK3P27448 753 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 PTH1RQ03431 593 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 CAMK1Q14012 370 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 DNAJB3Q8WWF6 145 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 LINC01599Q8WXQ3 324 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 SEPT1Q8WYJ6 367 aa12.31□□□□□ -0.44
SYNE2-221ENST00000556342 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms