RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 CXCL10P02778 98 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 TRAF1Q13077 416 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 PTK7Q13308 1070 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 STXBP2Q15833 593 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 TIGD5Q53EQ6 642 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 DBF4BQ8NFT6 615 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 RRP36Q96EU6 259 aaKnown RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 GZF1Q9H116 711 aaPredicted RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 GLT8D2Q9H1C3 349 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 TMEM63CQ9P1W3 806 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
CHGA-205ENST00000556098 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
CHGA-205ENST00000556098 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
CHGA-205ENST00000556098 CAVIN2O95810 425 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 CFBP00751 764 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 GNA11P29992 359 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 CTNNB1P35222 781 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 ME1P48163 572 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
CHGA-205ENST00000556098 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
CHGA-205ENST00000556098 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 NSUN6Q8TEA1 469 aaKnown RBP12.53□□□□□ -0.4
CHGA-205ENST00000556098 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
CHGA-205ENST00000556098 ABCB11O95342 1321 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
CHGA-205ENST00000556098 FOSBP53539 338 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 MBTPS1Q14703 1052 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 MCTP2Q6DN12 878 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 FAM173BQ6P4H8 233 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.41
CHGA-205ENST00000556098 MRPS27Q92552 414 aaKnown RBP12.52□□□□□ -0.41
CHGA-205ENST00000556098 SEPT8Q92599 483 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.41
CHGA-205ENST00000556098 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
CHGA-205ENST00000556098 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 BTBD18B2RXH4 712 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 CUTAO60888 179 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 IBSPP21815 317 aaPredicted RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 NLRP5P59047 1200 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 ZP2Q05996 745 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 LAMC2Q13753 1193 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 HIC1Q14526 733 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 TRIM71Q2Q1W2 868 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 TMEM192Q8IY95 271 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 PABPC5Q96DU9 382 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 CHAMP1Q96JM3 812 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 PYM1Q9BRP8 204 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 IFIH1Q9BYX4 1025 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 CLSTN2Q9H4D0 955 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 GRPEL1Q9HAV7 217 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
CHGA-205ENST00000556098 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
CHGA-205ENST00000556098 C17orf102A2RUQ5 167 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 GGPS1O95749 300 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 F2P00734 622 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 CMA1P23946 247 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 IRS1P35568 1242 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 RBL2Q08999 1139 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
CHGA-205ENST00000556098 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 BLIDQ8IZY5 108 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
CHGA-205ENST00000556098 TIGD1Q96MW7 591 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms