RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SPECC1LQ69YQ0 1117 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 ARMCX5Q6P1M9 558 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 UNC13DQ70J99 1090 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 LDHDQ86WU2 507 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 MCF2L2Q86YR7 1114 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 VWA5B2Q8N398 1253 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 CCDC112Q8NEF3 446 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 NLGN2Q8NFZ4 835 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 ERMNQ8TAM6 284 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SNX29Q8TEQ0 813 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 C12orf42Q96LP6 360 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 FEZ1Q99689 392 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 GLIS2Q9BZE0 524 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-235ENST00000556082 TMX1Q9H3N1 280 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 AS3MTQ9HBK9 375 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SPON1Q9HCB6 807 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 EXOC1Q9NV70 894 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 ADD3Q9UEY8 706 aaKnown RBP9.26□□□□□ -0.93
ATXN3-235ENST00000556082 ZNF541Q9H0D2 1346 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 ARFGEF1Q9Y6D6 1849 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 IGLV3-22A0A075B6J6 115 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 BICDL2A1A5D9 508 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 MYMKA6NI61 221 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 C19orf81C9J6K1 198 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 FAM86B1E9PN63 330 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 FAM86B2P0C5J1 330 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 MUTP22033 750 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 CCNE1P24864 410 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 RPA1P27694 616 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 PBX1P40424 430 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 HSD17B4P51659 736 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 ASIC1P78348 528 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 SUPT20HL1Q3ZLR7 823 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 FILIP1LQ4L180 1135 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 PRR16Q569H4 304 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 NOL9Q5SY16 702 aaKnown RBP9.25□□□□□ -0.93
ATXN3-235ENST00000556082 NBPF12Q5TAG4 269 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-235ENST00000556082 HAUS3Q68CZ6 603 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 KLHL10Q6JEL2 608 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 TTI2Q6NXR4 508 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 SMYD4Q8IYR2 804 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-235ENST00000556082 SCYL3Q8IZE3 742 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 ANKRD20A12PQ8NF67 263 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 PLIN2Q99541 437 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 POLR3CQ9BUI4 534 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-235ENST00000556082 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 SLC38A10Q9HBR0 1119 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 CTNND2Q9UQB3 1225 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 GDAQ9Y2T3 454 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 ZNF536O15090 1300 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 ITIH6Q6UXX5 1313 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 PITPNM2Q9BZ72 1349 aa9.25□□□□□ -0.93
ATXN3-235ENST00000556082 RNF225M0QZC1 329 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 MEIS1O00470 390 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 MSH4O15457 936 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 TUBB4AP04350 444 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 BCRP11274 1271 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 HOXA13P31271 388 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 CCT6AP40227 531 aaKnown RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 OAZ1P54368 228 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 BACE1P56817 501 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 STX17P56962 302 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 STK4Q13043 487 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 MCM6Q14566 821 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ECM1Q16610 540 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 TPD52L1Q16890 204 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 CEP55Q53EZ4 464 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 TCP11X2Q5H9J9 407 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ANGEL2Q5VTE6 544 aaKnown RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 CENPPQ6IPU0 288 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ARHGAP27Q6ZUM4 889 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 NIPA1Q7RTP0 329 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 FCHSD1Q86WN1 690 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 GUF1Q8N442 669 aaKnown RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 SLC5A5Q92911 643 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 P2RX5Q93086 422 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 DNAJC19Q96DA6 116 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 PICK1Q9NRD5 415 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 FBXO28Q9NVF7 368 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 VAV3Q9UKW4 847 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 PPP1R9AQ9ULJ8 1098 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ADAMTS5Q9UNA0 930 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-235ENST00000556082 RPTORQ8N122 1335 aa9.24□□□□□ -0.93
ATXN3-235ENST00000556082 FRMD3A2A2Y4 597 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 KCNJ18B7U540 433 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 ZBED4O75132 1171 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 CFBP00751 764 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 PLA2G4BP0C869 781 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 SPATA31C1P0DKV0 1188 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 PTPRAP18433 802 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 VCAM1P19320 739 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 ZNF76P36508 570 aa9.23□□□□□ -0.93
ATXN3-235ENST00000556082 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms