RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ACTR2P61160 394 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 EXOSC10Q01780 885 aaKnown RBP16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ADAM15Q13444 863 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 BTG3Q14201 252 aaPredicted RBP16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SPPL3Q8TCT6 385 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 P2RX5Q93086 422 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MSLNLQ96KJ4 702 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PLVAPQ9BX97 442 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CDHR5Q9HBB8 845 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PCDHA2Q9Y5H9 948 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 KDM3AQ9Y4C1 1321 aa16.44■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MEIS1O00470 390 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 DCXO43602 365 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MGEA5O60502 916 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CLUL1Q15846 466 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PLPPR4Q7Z2D5 763 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ADGRD2Q7Z7M1 963 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RSPH3Q86UC2 560 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CRYGNQ8WXF5 182 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 AGO4Q9HCK5 861 aaKnown RBP16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RIC8AQ9NPQ8 531 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RWDD3Q9Y3V2 267 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SLC12A7Q9Y666 1083 aa16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MYH9P35579 1960 aaKnown RBP16.43■□□□□ 0.22
CHMP4BP1-201ENST00000556017 STXBP3O00186 592 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 GLP2RO95838 553 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ALADP13716 330 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ATP4AP20648 1035 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 EP400NLQ6ZTU2 488 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 NPAS4Q8IUM7 802 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CMTR2Q8IYT2 770 aaKnown RBP16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TCEANC2Q96MN5 208 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CELF4Q9BZC1 486 aaKnown RBP16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CLEC1BQ9P126 229 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PCDHGC5Q9Y5F6 944 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TRPV2Q9Y5S1 764 aa16.42■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SMIM35A0A1B0GVV1 85 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 NCK2O43639 380 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CSPG5O95196 566 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TMEM266Q2M3C6 531 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 ERVK-5Q9HDB9 667 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 HCSTQ9UBK5 93 aa16.41■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 FAM86B1E9PN63 330 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 EYA4O95677 639 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 FAM86B2P0C5J1 330 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CDC27P30260 824 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SREBF1P36956 1147 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 STAT5BP51692 787 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IER5Q5VY09 327 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 CCDC60Q8IWA6 550 aaPredicted RBP16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 KIAA0319LQ8IZA0 1049 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 IGFLR1Q9H665 355 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 USP34Q70CQ2 3546 aa16.4■□□□□ 0.22
CHMP4BP1-201ENST00000556017 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SCG2P13521 617 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NAPAP54920 295 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 PPP1R18Q6NYC8 613 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 HFE2Q6ZVN8 426 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
CHMP4BP1-201ENST00000556017 EDIL3O43854 480 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KLRC1P26715 233 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 KRT76Q01546 638 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 PAK2Q13177 524 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 TEX2Q8IWB9 1127 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 EFHBQ8N7U6 833 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 SMRP1Q8NCR6 262 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 VN1R2Q8NFZ6 395 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ATP8B4Q8TF62 1192 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
CHMP4BP1-201ENST00000556017 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms