RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 BRDTQ58F21 947 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 TLK2Q86UE8 772 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 TRPV1Q8NER1 839 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 CCDC43Q96MW1 224 aaKnown RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 BLOC1S4Q9NUP1 217 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 GNEQ9Y223 722 aaKnown RBP12.32□□□□□ -0.44
TMEM260-208ENST00000555905 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 PTCH2Q9Y6C5 1203 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
TMEM260-208ENST00000555905 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 E9PMD0 336 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 FOXN1O15353 648 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 ADCY6O43306 1168 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 EYA4O95677 639 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 INHAP05111 366 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 SSBP05455 408 aaKnown RBP eCLIP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 MYL1P05976 194 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 PLA2G4BP0C869 781 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 RARBP10826 455 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 PYGBP11216 843 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 XRCC6P12956 609 aaKnown RBP eCLIP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 AFMP43652 599 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 CPT1AP50416 773 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 STAT5BP51692 787 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 MCM6Q14566 821 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 POSTNQ15063 836 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 UGCGQ16739 394 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 DGKDQ16760 1214 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 MAP3K21Q5TCX8 1036 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 OTUD6AQ7L8S5 288 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 KCNK18Q7Z418 384 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 CCDC60Q8IWA6 550 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 GLG1Q92896 1179 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 SPC25Q9HBM1 224 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 KBTBD4Q9NVX7 518 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 MAFBQ9Y5Q3 323 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-208ENST00000555905 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
TMEM260-208ENST00000555905 A0A087WWV3 80 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 ARHGEF35A5YM69 484 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 LGR5O75473 907 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 SMC2O95347 1197 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 MMP3P08254 477 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 PTGS1P23219 599 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 SLC26A2P50443 739 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 PSMC6P62333 389 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 PRKCEQ02156 737 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 PNOCQ13519 176 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 PLPPR4Q7Z2D5 763 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 CTU1Q7Z7A3 348 aaKnown RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 GRAMD1CQ8IYS0 662 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 FAM167AQ96KS9 214 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 BHMT2Q9H2M3 363 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
TMEM260-208ENST00000555905 DBR1Q9UK59 544 aaKnown RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-208ENST00000555905 A6NJR5 290 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 ZNF862O60290 1169 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 ZEB2O60315 1214 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 MSCO60682 206 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 OATP04181 439 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 LGALS2P05162 132 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 KRT18P05783 430 aaKnown RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 LBX1P52954 281 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 SLC12A3P55017 1021 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 SLC9C1Q4G0N8 1177 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
TMEM260-208ENST00000555905 GPBP1Q86WP2 473 aa12.29□□□□□ -0.44
TMEM260-208ENST00000555905 STAMQ92783 540 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms