RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 SLC9A5Q14940 896 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 C1orf141Q5JVX7 400 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 CABP7Q86V35 215 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 ZDHHC14Q8IZN3 488 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-233ENST00000555816 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 WHRNQ9P202 907 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 FAN1Q9Y2M0 1017 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 MAP2P11137 1827 aaKnown RBP6.61□□□□□ -1.35
ATXN3-233ENST00000555816 TAF1LQ8IZX4 1826 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
ATXN3-233ENST00000555816 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 F8W031 263 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 ADRB1P08588 477 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 TDRD10Q5VZ19 366 aaKnown RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 SAPCD2Q86UD0 394 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 PPFIBP1Q86W92 1011 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 BRF1Q92994 677 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 DBR1Q9UK59 544 aaKnown RBP6.6□□□□□ -1.35
ATXN3-233ENST00000555816 ZNF451Q9Y4E5 1061 aa6.6□□□□□ -1.35
ATXN3-233ENST00000555816 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-233ENST00000555816 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 TRBV23OR9-2A0A075B6M9 112 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 TP53P04637 393 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-233ENST00000555816 PRR5P85299 388 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 CPA5Q8WXQ8 436 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 TSPAN17Q96FV3 270 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 CRBNQ96SW2 442 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 PHAXQ9H814 394 aaKnown RBP6.59□□□□□ -1.35
ATXN3-233ENST00000555816 SUSD2Q9UGT4 822 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 NUDT5Q9UKK9 219 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
ATXN3-233ENST00000555816 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-233ENST00000555816 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 FAM86C2PA6NEL3 165 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 STARD3NLO95772 234 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 GLI4P10075 376 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 TCF3P15923 654 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-233ENST00000555816 FANCCQ00597 558 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 PLP2Q04941 152 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 FBXW10Q5XX13 1052 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 LIPIQ6XZB0 460 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-233ENST00000555816 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
ATXN3-233ENST00000555816 OR6P1Q8NGX9 317 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 GBP3Q9H0R5 595 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 NOL6Q9H6R4 1146 aaKnown RBP6.58□□□□□ -1.36
ATXN3-233ENST00000555816 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 PMF1-BGLAPU3KQ54 211 aa6.58□□□□□ -1.36
ATXN3-233ENST00000555816 ATF2P15336 505 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 EPHX2P34913 555 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 LIMS1P48059 325 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 NETO2Q8NC67 525 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 PEX11GQ96HA9 241 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 RCC1LQ96I51 464 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATXN3-233ENST00000555816 ITGB4P16144 1822 aa6.57□□□□□ -1.36
ATXN3-233ENST00000555816 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 AURKAO14965 403 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 PPM1BO75688 479 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 CD3EP07766 207 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 GRB10Q13322 594 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 ZYXQ15942 572 aaKnown RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 HEATR6Q6AI08 1181 aaKnown RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 LSRQ86X29 649 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-233ENST00000555816 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
ATXN3-233ENST00000555816 ZDHHC15Q96MV8 337 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms