RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
SRP54-208ENST00000555557 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 PCYT2Q99447 389 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 GPR20Q99678 358 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
SRP54-208ENST00000555557 ZNF236Q9UL36 1845 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
SRP54-208ENST00000555557 XRCC5P13010 732 aaKnown RBP11.37□□□□□ -0.59
SRP54-208ENST00000555557 IDEP14735 1019 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ATP4AP20648 1035 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 MUTP22033 750 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 NPEPPSP55786 919 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 TRIM32Q13049 653 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 MORC3Q14149 939 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 PLA2G4FQ68DD2 849 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 RINT1Q6NUQ1 792 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 TRIM50Q86XT4 487 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ZNF302Q9NR11 478 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 STBD1O95210 358 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 LYPLA2O95372 231 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 GH1P01241 217 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 MYL1P05976 194 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ELNP15502 786 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 IQSEC1Q6DN90 963 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ANO5Q75V66 913 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 AFG1LQ8WV93 481 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 ATP6V0A1Q93050 837 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
SRP54-208ENST00000555557 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
SRP54-208ENST00000555557 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
SRP54-208ENST00000555557 FSD2A1L4K1 749 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
SRP54-208ENST00000555557 FKTNO75072 461 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 KRT18P05783 430 aaKnown RBP11.36□□□□□ -0.59
SRP54-208ENST00000555557 RARRES1P49788 294 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 STAT5BP51692 787 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
SRP54-208ENST00000555557 PRKCEQ02156 737 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 LAMC2Q13753 1193 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 GIT2Q14161 759 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 MAEAQ7L5Y9 396 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 TRPV1Q8NER1 839 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 REEP2Q9BRK0 252 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 LRRC27Q9C0I9 530 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 ZHX3Q9H4I2 956 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 SRRDQ9UH36 339 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 HTTP42858 3142 aa11.36□□□□□ -0.59
SRP54-208ENST00000555557 MGAMO43451 1857 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 ARHGEF35A5YM69 484 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 SFI1A8K8P3 1242 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 RSPH10B2B2RC85 870 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 RSPH10BP0C881 870 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 MARK3P27448 753 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 ZNF165P49910 485 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 PADI6Q6TGC4 694 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 LUZP1Q86V48 1076 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 OR6J1Q8NGC5 347 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 GLG1Q92896 1179 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 AZI2Q9H6S1 392 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 GNEQ9Y223 722 aaKnown RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 BRCA2P51587 3418 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 IGSF9BQ9UPX0 1349 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 HOXD10P28358 340 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 STK4Q13043 487 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 MFSD14CQ5VZR4 134 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 CNNM4Q6P4Q7 775 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 UNC13DQ70J99 1090 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 TRIML1Q8N9V2 468 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 PPTC7Q8NI37 304 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 CEP170P1Q96L14 293 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 RMND1Q9NWS8 449 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 TBC1D7Q9P0N9 293 aa11.35□□□□□ -0.59
SRP54-208ENST00000555557 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
SRP54-208ENST00000555557 THSD7BQ9C0I4 1608 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 PVALEFA0A1B0GWK0 134 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 USO1O60763 962 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms