RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MACROD2A1Z1Q3 448 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 CALUO43852 315 aaPredicted RBP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 FAM13AO94988 1023 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 ZRANB2O95218 330 aaKnown RBP eCLIP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 GAP43P17677 238 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 CASP4P49662 377 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 WHAMMP3Q1A5X7 153 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 ZC2HC1CQ53FD0 456 aaPredicted RBP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 FRMD5Q7Z6J6 570 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 MYCT1Q8N699 235 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 BANK1Q8NDB2 785 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 KCNH7Q9NS40 1196 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 CNOT7Q9UIV1 285 aaKnown RBP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 GJA3Q9Y6H8 435 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 CLIC2O15247 247 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 TGFB1I1O43294 461 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 SEC31AO94979 1220 aaKnown RBP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 NR3C1P04150 777 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 MTMR2Q13614 643 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 DPY19L2P1Q6NXN4 242 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 NACC1Q96RE7 527 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 FIZ1Q96SL8 496 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 IFIH1Q9BYX4 1025 aaKnown RBP26.73■■□□□ 1.87
TMEM260-207ENST00000555497 FHOD1Q9Y613 1164 aa26.73■■□□□ 1.87
TMEM260-207ENST00000555497 ZMYM2Q9UBW7 1377 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 FRMPD4Q14CM0 1322 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 VCAM1P19320 739 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 GHRHRQ02643 423 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 KIF5AQ12840 1032 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 RIT2Q99578 217 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 LXNQ9BS40 222 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 GANQ9H2C0 597 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 DEF6Q9H4E7 631 aa26.72■■□□□ 1.87
TMEM260-207ENST00000555497 ARMCX3Q9UH62 379 aaPredicted RBP26.72■■□□□ 1.87
TMEM260-207ENST00000555497 DHX15O43143 795 aaKnown RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 AKR1B10O60218 316 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 FLOT1O75955 427 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 MRPS9P82933 396 aaKnown RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 PAPD7Q5XG87 772 aaKnown RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 ARHGAP27Q6ZUM4 889 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 KSR1Q8IVT5 923 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 SYTL5Q8TDW5 730 aaPredicted RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 ANKZF1Q9H8Y5 726 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 ARGLU1Q9NWB6 273 aaPredicted RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 BCRP11274 1271 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 MUTP22033 750 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 MAPK8IP2Q13387 824 aaPredicted RBP26.71■■□□□ 1.87
TMEM260-207ENST00000555497 MTFR1LQ9H019 292 aa26.71■■□□□ 1.87
TMEM260-207ENST00000555497 SRGAP2O75044 1071 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 ACTN1P12814 892 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 GFPT1Q06210 699 aaPredicted RBP26.7■■□□□ 1.87
TMEM260-207ENST00000555497 EHBP1Q8NDI1 1231 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 TAAR1Q96RJ0 339 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 MLXIPQ9HAP2 919 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 PPP1R9AQ9ULJ8 1098 aa26.7■■□□□ 1.87
TMEM260-207ENST00000555497 ITGB3BPQ13352 177 aaPredicted RBP26.7■■□□□ 1.86
TMEM260-207ENST00000555497 TKFCQ3LXA3 575 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 SFMBT2Q5VUG0 894 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 TMCO3Q6UWJ1 677 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 MCF2L2Q86YR7 1114 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 RPAP3Q9H6T3 665 aaPredicted RBP26.7■■□□□ 1.86
TMEM260-207ENST00000555497 PARVGQ9HBI0 331 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 UBIAD1Q9Y5Z9 338 aa26.7■■□□□ 1.86
TMEM260-207ENST00000555497 MYH10P35580 1976 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 SLC9A1P19634 815 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 ZNF131P52739 623 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 PRAMEF18Q5VWM3 479 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 SYN2Q92777 582 aaPredicted RBP26.69■■□□□ 1.86
TMEM260-207ENST00000555497 WNK4Q96J92 1243 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 FZD1Q9UP38 647 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 MYH11P35749 1972 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 SSU72P8A0A1W2PR75 194 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 FZD9O00144 591 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 EIF3DO15371 548 aaKnown RBP eCLIP26.69■■□□□ 1.86
TMEM260-207ENST00000555497 EPS15P42566 896 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 SPP2Q13103 211 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 SECISBP2LQ93073 1101 aaKnown RBP26.69■■□□□ 1.86
TMEM260-207ENST00000555497 TSGA10Q9BZW7 698 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 AGO4Q9HCK5 861 aaKnown RBP26.69■■□□□ 1.86
TMEM260-207ENST00000555497 CAPN6Q9Y6Q1 641 aa26.69■■□□□ 1.86
TMEM260-207ENST00000555497 CTAGE15A4D2H0 777 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 CTAGE8P0CG41 777 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 PNMA6AP0CW24 399 aaPredicted RBP26.68■■□□□ 1.86
TMEM260-207ENST00000555497 COG2Q14746 738 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 PCNX4Q63HM2 1172 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 CC2D1AQ6P1N0 951 aaPredicted RBP26.68■■□□□ 1.86
TMEM260-207ENST00000555497 CTAGE6Q86UF2 777 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 CTAGE4Q8IX94 777 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 GINM1Q9NU53 330 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 SAR1BQ9Y6B6 198 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 UTRNP46939 3433 aa26.68■■□□□ 1.86
TMEM260-207ENST00000555497 AFPP02771 609 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 RPS6P62753 249 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 NIPA1Q7RTP0 329 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 ZNF720Q7Z2F6 126 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 MIER3Q7Z3K6 550 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 NOA1Q8NC60 698 aaKnown RBP26.67■■□□□ 1.86
TMEM260-207ENST00000555497 BORCS6Q96GS4 357 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 SALL4Q9UJQ4 1053 aa26.67■■□□□ 1.86
TMEM260-207ENST00000555497 PARP14Q460N5 1801 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms