RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 GABBR1Q9UBS5 961 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 USP25Q9UHP3 1055 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ZNF215Q9UL58 517 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 GRIN2DO15399 1336 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 WDR64B1ANS9 1081 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ARVCFO00192 962 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 EML1O00423 815 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ADCY5O95622 1261 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PSAPP07602 524 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 OR52Z1P0C646 297 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 SYN1P17600 705 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TECP42680 631 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TRAPPC10P48553 1259 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 STAT5BP51692 787 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 IGBP1P78318 339 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TLE2Q04725 743 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TYRO3Q06418 890 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 RILPL1Q5EBL4 403 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ZNF746Q6NUN9 644 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 SLFN12Q8IYM2 578 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PCYT2Q99447 389 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 SMARCAD1Q9H4L7 1026 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ZNF302Q9NR11 478 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TRMT13Q9NUP7 481 aaKnown RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 HDAC6Q9UBN7 1215 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 ZMYND8Q9ULU4 1186 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PCDHA12Q9UN75 941 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 TRPC6Q9Y210 931 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 PCDHA10Q9Y5I2 948 aa11.06□□□□□ -0.64
PSEN1-213ENST00000555386 POTEMA6NI47 508 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 F2P00734 622 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 ZNF200P98182 395 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-213ENST00000555386 FAM160B1Q5W0V3 765 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 NOD1Q9Y239 953 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 CLIC4Q9Y696 253 aa11.05□□□□□ -0.64
PSEN1-213ENST00000555386 A0A087WWV3 80 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 DCDC2CA8MYV0 355 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 RBAK-RBAKDNI3L0D1 243 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 TBX3O15119 743 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 B4GALT4O60513 344 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 NR1I2O75469 434 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 YEATS4O95619 227 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SMIM10L2AP0DMW4 78 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SMIM10L2BP0DMW5 78 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 CYP2C9P11712 490 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 HOXD8P13378 290 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 JAK3P52333 1124 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 CYP4A11Q02928 519 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SF3A1Q15459 793 aaKnown RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 ZRSR1Q15695 479 aaKnown RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 UGCGQ16739 394 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SASS6Q6UVJ0 657 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SMAP1Q8IYB5 467 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 TRAPPC12Q8WVT3 735 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 NAP1L5Q96NT1 182 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
PSEN1-213ENST00000555386 SETD4Q9NVD3 440 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 ERAP1Q9NZ08 941 aa11.04□□□□□ -0.64
PSEN1-213ENST00000555386 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
PSEN1-213ENST00000555386 LGR5O75473 907 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 ATG7O95352 703 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 TPM2P07951 284 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-213ENST00000555386 SFNP31947 248 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 RGS19P49795 217 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
PSEN1-213ENST00000555386 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 PTGISQ16647 500 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 TMEM266Q2M3C6 531 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 TPH2Q8IWU9 490 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 C4orf32Q8N8J7 132 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 TMEM39AQ9NV64 488 aa11.03□□□□□ -0.64
PSEN1-213ENST00000555386 RGL1Q9NZL6 768 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms