RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KCTD17Q8N5Z5 321 aa16■□□□□ 0.15
CHD8-208ENST00000555301 SLC43A3Q8NBI5 491 aa16■□□□□ 0.15
CHD8-208ENST00000555301 CLIC6Q96NY7 704 aa16■□□□□ 0.15
CHD8-208ENST00000555301 RNPEPQ9H4A4 650 aa16■□□□□ 0.15
CHD8-208ENST00000555301 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
CHD8-208ENST00000555301 NRCAMQ92823 1304 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 PP2D1A8MPX8 630 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 MED24O75448 989 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 SPATA31C1P0DKV0 1188 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 GNAT1P11488 350 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 ATP4AP20648 1035 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 CDC25AP30304 524 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 SLC39A5Q6ZMH5 540 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 OTUD6AQ7L8S5 288 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 CABP7Q86V35 215 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 NACC1Q96RE7 527 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 CCSER1Q9C0I3 900 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
CHD8-208ENST00000555301 GRIN2DO15399 1336 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 RRN3P2A6NIE6 340 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 SMIM10L2AP0DMW4 78 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 SMIM10L2BP0DMW5 78 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 XRCC6P12956 609 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHD8-208ENST00000555301 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 ATN1P54259 1190 aaPredicted RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 PPFIA1Q13136 1202 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 SNX17Q15036 470 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 ZNF484Q5JVG2 852 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 HYIQ5T013 277 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 AXDND1Q5T1B0 1012 aaPredicted RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 ADALQ6DHV7 355 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 MMTAG2Q9BU76 263 aaKnown RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 WRAP73Q9P2S5 460 aaPredicted RBP15.98■□□□□ 0.15
CHD8-208ENST00000555301 HDAC6Q9UBN7 1215 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 CCDC39Q9UFE4 941 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 GTF2IRD1Q9UHL9 959 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
CHD8-208ENST00000555301 C17orf102A2RUQ5 167 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 INSRRP14616 1297 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 CDK7P50613 346 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 ZRSR1Q15695 479 aaKnown RBP15.97■□□□□ 0.15
CHD8-208ENST00000555301 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 TRMT1LQ7Z2T5 733 aaKnown RBP15.97■□□□□ 0.15
CHD8-208ENST00000555301 EPSTI1Q96J88 318 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
CHD8-208ENST00000555301 ANKEF1Q9NU02 776 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
CHD8-208ENST00000555301 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 COL1A2P08123 1366 aa15.97■□□□□ 0.15
CHD8-208ENST00000555301 GOLGA6L4A6NEF3 574 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 STBD1O95210 358 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 HOXC8P31273 242 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 GRIK4Q16099 956 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 POTEGQ6S5H5 508 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 SHC4Q6S5L8 630 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 ANO5Q75V66 913 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 ANKRD33Q7Z3H0 272 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.15
CHD8-208ENST00000555301 TOX2Q96NM4 488 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 GBP4Q96PP9 640 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 HTATIP2Q9BUP3 242 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 DDX19AQ9NUU7 478 aaKnown RBP15.96■□□□□ 0.15
CHD8-208ENST00000555301 SETD4Q9NVD3 440 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 DNM3Q9UQ16 869 aa15.96■□□□□ 0.15
CHD8-208ENST00000555301 A0A1W2PQ27 194 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 A0A1W2PQ64 194 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 A0A1W2PQD8 194 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 TLR3O15455 904 aaKnown RBP15.95■□□□□ 0.14
CHD8-208ENST00000555301 CMA1P23946 247 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 GRB10Q13322 594 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 ECM1Q16610 540 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 TMEM119Q4V9L6 283 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 RESP18Q5W5W9 173 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 USP49Q70CQ1 688 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 EXOC8Q8IYI6 725 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 PIGOQ8TEQ8 1089 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 LMBR1Q8WVP7 490 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 PNMA5Q96PV4 448 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 CYP26B1Q9NR63 512 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
CHD8-208ENST00000555301 NOD1Q9Y239 953 aa15.95■□□□□ 0.14
CHD8-208ENST00000555301 DCDC2CA8MYV0 355 aa15.94■□□□□ 0.14
CHD8-208ENST00000555301 MAGEB2O15479 319 aa15.94■□□□□ 0.14
CHD8-208ENST00000555301 RTP1P59025 263 aa15.94■□□□□ 0.14
CHD8-208ENST00000555301 IGBP1P78318 339 aa15.94■□□□□ 0.14
CHD8-208ENST00000555301 ADAM17P78536 824 aa15.94■□□□□ 0.14
CHD8-208ENST00000555301 KARSQ15046 597 aaKnown RBP15.94■□□□□ 0.14
CHD8-208ENST00000555301 TARBP2Q15633 366 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms