RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 PROM2Q8N271 834 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 TATDN2Q93075 761 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 COA7Q96BR5 231 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 HOOK2Q96ED9 719 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 OSBPL7Q9BZF2 842 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 MYMKA6NI61 221 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 PPP1R12AO14974 1030 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 NCK2O43639 380 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 FCER1AP12319 257 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 HSD17B3P37058 310 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 RASSF7Q02833 373 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 TLDC1Q6P9B6 456 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 RRAGAQ7L523 313 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 CACNA2D4Q7Z3S7 1137 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 ADGRF4Q8IZF3 695 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 MAB21L3Q8N8X9 362 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 SNX29Q8TEQ0 813 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 KRT12Q99456 494 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 NT5C3AQ9H0P0 336 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
MTHFD1-210ENST00000555252 ZBTB5O15062 677 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 NPR1P16066 1061 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 ALDH1B1P30837 517 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 SCTRP47872 440 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 TAF4BQ92750 862 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 MRIQ9BWK5 157 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 EHD2Q9NZN4 543 aa11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-210ENST00000555252 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 RAD51CO43502 376 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SLC37A4O43826 429 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 PALMO75781 387 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 TDP2O95551 362 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SHMT1P34896 483 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SLC1A4P43007 532 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 TNNI2P48788 182 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 ZNF844Q08AG5 666 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 HYIQ5T013 277 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CCT6BQ92526 530 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SLC39A2Q9NP94 309 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 DDX4Q9NQI0 724 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 SMARCAL1Q9NZC9 954 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CCDC189A1A4V9 331 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 MARCH6O60337 910 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 ANXA13P27216 316 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 ECHS1P30084 290 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CTNNA1P35221 906 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 EHHADHQ08426 723 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 ITIH4Q14624 930 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CROCCP2Q86T23 111 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 RSRC1Q96IZ7 334 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 PSMB7Q99436 277 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 DHX36Q9H2U1 1008 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 PSTPIP2Q9H939 334 aa11.67□□□□□ -0.54
MTHFD1-210ENST00000555252 DNM1LO00429 736 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 EPHB6O15197 1021 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 EDIL3O43854 480 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 RXRBP28702 533 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 USP11P51784 963 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 IRX1P78414 480 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 MOXD1Q6UVY6 613 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 SEC14L1Q92503 715 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 DDX12PQ92771 950 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 MKL1Q969V6 931 aa11.66□□□□□ -0.54
MTHFD1-210ENST00000555252 MOV10L1Q9BXT6 1211 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms