RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MCM3APO60318 1980 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 PFASO15067 1338 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 UBE4BO95155 1302 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
TDP1-210ENST00000554976 IDEP14735 1019 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 ADKP55263 362 aaKnown RBP9.87□□□□□ -0.83
TDP1-210ENST00000554976 SP2Q02086 613 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 DMTNQ08495 405 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 ZNF746Q6NUN9 644 aaPredicted RBP9.87□□□□□ -0.83
TDP1-210ENST00000554976 MIER3Q7Z3K6 550 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 MORC4Q8TE76 937 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 BORCS6Q96GS4 357 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 MS4A4AQ96JQ5 239 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
TDP1-210ENST00000554976 IGSF9BQ9UPX0 1349 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 STX10O60499 249 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 GAP43P17677 238 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 ALDH5A1P51649 535 aaPredicted RBP9.86□□□□□ -0.83
TDP1-210ENST00000554976 JAK3P52333 1124 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 HERVK_113P62684 666 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
TDP1-210ENST00000554976 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 FAM114A1Q8IWE2 563 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 REXO1L1PQ8IX06 675 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 DNAJC7Q99615 494 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 MOV10L1Q9BXT6 1211 aaKnown RBP9.86□□□□□ -0.83
TDP1-210ENST00000554976 PDLIM7Q9NR12 457 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 IGKV6D-21A0A0A0MT36 114 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 B4DLN1 442 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 TGFB1I1O43294 461 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 CASP14P31944 242 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 SFNP31947 248 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 RARRES1P49788 294 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 CNTN2Q02246 1040 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 TPD52L1Q16890 204 aaPredicted RBP9.86□□□□□ -0.83
TDP1-210ENST00000554976 FIGNQ5HY92 759 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 PPP1R13BQ96KQ4 1090 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
TDP1-210ENST00000554976 SLC45A1Q9Y2W3 748 aa9.86□□□□□ -0.83
TDP1-210ENST00000554976 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 TRAF5O00463 557 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 MYCLP12524 364 aaPredicted RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 KLK7P49862 253 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 DNM2P50570 870 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 KRT76Q01546 638 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 RAD51AP2Q09MP3 1159 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 TRIM14Q14142 442 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 Q3C1V9 767 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 VWA3BQ502W6 1294 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 HERC4Q5GLZ8 1057 aaPredicted RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 GADL1Q6ZQY3 521 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ABHD10Q9NUJ1 306 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 TBC1D7Q9P0N9 293 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 SEL1LQ9UBV2 794 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 CAPN11Q9UMQ6 739 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 A0A1W2PQJ5 194 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 PDXKO00764 312 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 N4BP3O15049 544 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 FANCGO15287 622 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 SSBP05455 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
TDP1-210ENST00000554976 MAPTP10636 758 aaKnown RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 QARSP47897 775 aaKnown RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 ERVK-24P63145 666 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 KCNA1Q09470 495 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 KNOP1Q1ED39 458 aaKnown RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 FILIP1LQ4L180 1135 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ZNF720Q7Z2F6 126 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 TRIM59Q8IWR1 403 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 KCNN1Q92952 543 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 CCDC51Q96ER9 411 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 FBXO40Q9UH90 709 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 CTDP1Q9Y5B0 961 aaPredicted RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 WDR64B1ANS9 1081 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ARHGAP6O43182 974 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ZNF862O60290 1169 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 NF2P35240 595 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 UBXN1Q04323 297 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 WDR59Q6PJI9 974 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 RAD9BQ6WBX8 426 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ANO5Q75V66 913 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 ARMC9Q7Z3E5 817 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 NLRX1Q86UT6 975 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 BAG1Q99933 345 aaPredicted RBP9.85□□□□□ -0.83
TDP1-210ENST00000554976 ST6GALNAC4Q9H4F1 302 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.85□□□□□ -0.83
TDP1-210ENST00000554976 COL4A3BPQ9Y5P4 624 aa9.85□□□□□ -0.83
TDP1-210ENST00000554976 SYNGAP1Q96PV0 1343 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 BACH1O14867 736 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 YWHABP31946 246 aaKnown RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 PSMC5P62195 406 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 FKBP3Q00688 224 aaKnown RBP9.84□□□□□ -0.83
TDP1-210ENST00000554976 GPR162Q16538 588 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 MEA1Q16626 185 aa9.84□□□□□ -0.83
TDP1-210ENST00000554976 MAN2A1Q16706 1144 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms