RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 PTPROQ16827 1216 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 IER5Q5VY09 327 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 ABHD15Q6UXT9 468 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 Q6ZUG5 572 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 CRIPAKQ8N1N5 446 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 LINC01599Q8WXQ3 324 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 ZNF689Q96CS4 500 aaPredicted RBP24.91■■□□□ 1.58
RCCD1-202ENST00000554302 ZMYND12Q9H0C1 365 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 SNX14Q9Y5W7 946 aa24.91■■□□□ 1.58
RCCD1-202ENST00000554302 TTC3P53804 2025 aa24.9■■□□□ 1.58
RCCD1-202ENST00000554302 SMIM35A0A1B0GVV1 85 aa24.9■■□□□ 1.58
RCCD1-202ENST00000554302 PKN1Q16512 942 aa24.9■■□□□ 1.58
RCCD1-202ENST00000554302 TRAPPC12Q8WVT3 735 aa24.9■■□□□ 1.58
RCCD1-202ENST00000554302 FAM49AQ9H0Q0 323 aaPredicted RBP24.9■■□□□ 1.58
RCCD1-202ENST00000554302 ADGRA3Q8IWK6 1321 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 KDM3AQ9Y4C1 1321 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 POTEB3A0JP26 581 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 ADAMTS3O15072 1205 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 CD52P31358 61 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 LEXMQ3ZCV2 418 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 TIGD5Q53EQ6 642 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 JAKMIP3Q5VZ66 844 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 POTEBQ6S5H4 581 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 RTN4RL1Q86UN2 441 aaPredicted RBP24.89■■□□□ 1.58
RCCD1-202ENST00000554302 FIBCD1Q8N539 461 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 CLP1Q92989 425 aaKnown RBP24.89■■□□□ 1.58
RCCD1-202ENST00000554302 BRF1Q92994 677 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 JAKMIP1Q96N16 626 aaKnown RBP24.89■■□□□ 1.58
RCCD1-202ENST00000554302 TRPV2Q9Y5S1 764 aa24.89■■□□□ 1.58
RCCD1-202ENST00000554302 IGSF9BQ9UPX0 1349 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 PRPF3O43395 683 aaKnown RBP24.88■■□□□ 1.57
RCCD1-202ENST00000554302 RB1P06400 928 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 ZNF76P36508 570 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 FGD1P98174 961 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 COL19A1Q14993 1142 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 NTRK3Q16288 839 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 MCTP2Q6DN12 878 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 BLOC1S2Q6QNY1 142 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 MTHFD1LQ6UB35 978 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 PLA2G4DQ86XP0 818 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 NME8Q8N427 588 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 BANK1Q8NDB2 785 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 FTHL17Q9BXU8 183 aa24.88■■□□□ 1.57
RCCD1-202ENST00000554302 DGKIO75912 1065 aa24.87■■□□□ 1.57
RCCD1-202ENST00000554302 COL9A1P20849 921 aa24.87■■□□□ 1.57
RCCD1-202ENST00000554302 BMPR1AP36894 532 aa24.87■■□□□ 1.57
RCCD1-202ENST00000554302 CCDC60Q8IWA6 550 aaPredicted RBP24.87■■□□□ 1.57
RCCD1-202ENST00000554302 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.87■■□□□ 1.57
RCCD1-202ENST00000554302 CELF4Q9BZC1 486 aaKnown RBP24.87■■□□□ 1.57
RCCD1-202ENST00000554302 NAP1L2Q9ULW6 460 aaPredicted RBP24.87■■□□□ 1.57
RCCD1-202ENST00000554302 PADI3Q9ULW8 664 aa24.87■■□□□ 1.57
RCCD1-202ENST00000554302 RWDD3Q9Y3V2 267 aa24.87■■□□□ 1.57
RCCD1-202ENST00000554302 IPO5O00410 1097 aaKnown RBP24.86■■□□□ 1.57
RCCD1-202ENST00000554302 HBP1O60381 514 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 RPS6KB1P23443 525 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 EVCP57679 992 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 TMEM62Q0P6H9 643 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 NEK9Q8TD19 979 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 ATP8B4Q8TF62 1192 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 CCDC12Q8WUD4 166 aaPredicted RBP24.86■■□□□ 1.57
RCCD1-202ENST00000554302 C6orf50Q9HD87 102 aa24.86■■□□□ 1.57
RCCD1-202ENST00000554302 COL1A2P08123 1366 aa24.85■■□□□ 1.57
RCCD1-202ENST00000554302 DDX39AO00148 427 aaKnown RBP24.85■■□□□ 1.57
RCCD1-202ENST00000554302 KCNA5P22460 613 aa24.85■■□□□ 1.57
RCCD1-202ENST00000554302 FAM160B1Q5W0V3 765 aa24.85■■□□□ 1.57
RCCD1-202ENST00000554302 REXO1Q8N1G1 1221 aaKnown RBP24.85■■□□□ 1.57
RCCD1-202ENST00000554302 C1QTNF1Q9BXJ1 281 aa24.85■■□□□ 1.57
RCCD1-202ENST00000554302 LMAN2LQ9H0V9 348 aa24.85■■□□□ 1.57
RCCD1-202ENST00000554302 NSUN3Q9H649 340 aaKnown RBP24.85■■□□□ 1.57
RCCD1-202ENST00000554302 ZBTB42B2RXF5 422 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 M0QZ92 97 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 ATP4AP20648 1035 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 KLRC1P26715 233 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 CIITAP33076 1130 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 CTNNB1P35222 781 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 SETQ01105 290 aaPredicted RBP24.84■■□□□ 1.57
RCCD1-202ENST00000554302 TCEAL5Q5H9L2 206 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 FAM43BQ6ZT52 329 aaPredicted RBP24.84■■□□□ 1.57
RCCD1-202ENST00000554302 PABPC5Q96DU9 382 aaKnown RBP24.84■■□□□ 1.57
RCCD1-202ENST00000554302 C11orf84Q9BUA3 381 aaPredicted RBP24.84■■□□□ 1.57
RCCD1-202ENST00000554302 RNF26Q9BY78 433 aaPredicted RBP24.84■■□□□ 1.57
RCCD1-202ENST00000554302 ZNF302Q9NR11 478 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 TBC1D22BQ9NU19 505 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 LOXHD1Q8IVV2 1947 aa24.84■■□□□ 1.57
RCCD1-202ENST00000554302 ATG2AQ2TAZ0 1938 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 BACH1O14867 736 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 GNA11P29992 359 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 KRT76Q01546 638 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 BTG3Q14201 252 aaPredicted RBP24.83■■□□□ 1.57
RCCD1-202ENST00000554302 ZNF484Q5JVG2 852 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 ZNF746Q6NUN9 644 aaPredicted RBP24.83■■□□□ 1.57
RCCD1-202ENST00000554302 MIS18BP1Q6P0N0 1132 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 NPAS4Q8IUM7 802 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 KIAA0319LQ8IZA0 1049 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 PHKBQ93100 1093 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 ZNF577Q9BSK1 485 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 TMX1Q9H3N1 280 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 CD320Q9NPF0 282 aa24.83■■□□□ 1.57
RCCD1-202ENST00000554302 MAFBQ9Y5Q3 323 aaPredicted RBP24.83■■□□□ 1.57
RCCD1-202ENST00000554302 IFNAR1P17181 557 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms