RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KLK7P49862 253 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 CDK7P50613 346 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 CNGA2Q16280 664 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 RRAGBQ5VZM2 374 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 OLFML2BQ68BL8 750 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 SPATA24Q86W54 205 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 IQCF2Q8IXL9 164 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 KLHL7Q8IXQ5 586 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 MYOCDQ8IZQ8 938 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 DEPTORQ8TB45 409 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 LRRC8CQ8TDW0 803 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 INPP5DQ92835 1189 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 ABTB1Q969K4 478 aaPredicted RBP10.35□□□□□ -0.75
SIX4-202ENST00000554079 CCDC42Q96M95 316 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 DENND2DQ9H6A0 471 aaPredicted RBP10.35□□□□□ -0.75
SIX4-202ENST00000554079 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 DDX43Q9NXZ2 648 aaKnown RBP10.35□□□□□ -0.75
SIX4-202ENST00000554079 ARHGAP20Q9P2F6 1191 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 LARSQ9P2J5 1176 aaKnown RBP10.35□□□□□ -0.75
SIX4-202ENST00000554079 DISP2A7MBM2 1401 aa10.35□□□□□ -0.75
SIX4-202ENST00000554079 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
SIX4-202ENST00000554079 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 BTBD19C9JJ37 291 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 RGL2O15211 777 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 WDR46O15213 610 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 BIRC5O15392 142 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 PABPC4LP0CB38 370 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 UBTFL6P0CB48 400 aaPredicted RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 MYL6BP14649 208 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 IFNAR2P48551 515 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 DNM2P50570 870 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 KIF11P52732 1056 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SNX30Q5VWJ9 437 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 CGB2Q6NT52 195 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 DIS3LQ8TF46 1054 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 COG3Q96JB2 828 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 OLFM3Q96PB7 478 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ARHGEF38Q9NXL2 777 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 IL1RAPL1Q9NZN1 696 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ZNF180Q9UJW8 692 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 CROTQ9UKG9 612 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SYNPO2Q9UMS6 1093 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ZNF148Q9UQR1 794 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 USH1CQ9Y6N9 552 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 XDHP47989 1333 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 BOLA2-SMG1P6H3BVE0 249 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ZPR1O75312 459 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ENTPD5O75356 428 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 NUDT17P0C025 328 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 TROVE2P10155 538 aaKnown RBP eCLIP10.34□□□□□ -0.75
SIX4-202ENST00000554079 PYGMP11217 842 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 EEF1GP26641 437 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 EMP3P54852 163 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 MTTPP55157 894 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 ADARP55265 1226 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 GEMIN4P57678 1058 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 GIT2Q14161 759 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 MAP7Q14244 749 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 HLFQ16534 295 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 BCL2A1Q16548 175 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 WDR72Q3MJ13 1102 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 FIGNQ5HY92 759 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 MARK2Q7KZI7 788 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 NANOGNBQ7Z5D8 188 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 KBTBD2Q8IY47 623 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SCFD2Q8WU76 684 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 CTNNBL1Q8WYA6 563 aaPredicted RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 SEC14L1Q92503 715 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 HAUS1Q96CS2 278 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 KAZALD1Q96I82 304 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 MPP4Q96JB8 637 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 NOX5Q96PH1 765 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 TUBGCP5Q96RT8 1024 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 HAUS7Q99871 368 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 PFDN4Q9NQP4 134 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 TBCCD1Q9NVR7 557 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 DBNLQ9UJU6 430 aaKnown RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
SIX4-202ENST00000554079 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.34□□□□□ -0.75
SIX4-202ENST00000554079 A6NJR5 290 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 H7C1D1 291 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 EIF3FO00303 357 aaPredicted RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 LSM1O15116 133 aaKnown RBP10.33□□□□□ -0.76
SIX4-202ENST00000554079 P4HA2O15460 535 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 ATP5HO75947 161 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 KRT38O76015 456 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 ASMTLO95671 621 aa10.33□□□□□ -0.76
SIX4-202ENST00000554079 PDGFRBP09619 1106 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms