RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GSTTP1A0A1W2PQM5 241 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 SH2B2O14492 632 aaPredicted RBP10.09□□□□□ -0.79
TDP1-208ENST00000553989 GRM6O15303 877 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 RPLP2P05387 115 aaKnown RBP10.09□□□□□ -0.79
TDP1-208ENST00000553989 CD52P31358 61 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 MRPS6P82932 125 aaKnown RBP10.09□□□□□ -0.79
TDP1-208ENST00000553989 MGAT3Q09327 533 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 FBXO47Q5MNV8 452 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 IER5Q5VY09 327 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 SMYD5Q6GMV2 418 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 TNPO1Q92973 898 aaKnown RBP10.09□□□□□ -0.79
TDP1-208ENST00000553989 ZBTB10Q96DT7 871 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
TDP1-208ENST00000553989 SDF4Q9BRK5 362 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 MTA3Q9BTC8 594 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 LRRC2Q9BYS8 371 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 SLC9A2Q9UBY0 812 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 PRKAG3Q9UGI9 489 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 PCDHA6Q9UN73 950 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 PCDHA8Q9Y5H6 950 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 KAT6AQ92794 2004 aa10.09□□□□□ -0.79
TDP1-208ENST00000553989 MBLAC1A4D2B0 266 aaPredicted RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 RRN3P2A6NIE6 340 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 ENPP3O14638 875 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 MAFGO15525 162 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 INSRRP14616 1297 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 NDUFV1P49821 464 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 NAPAP54920 295 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 ZP2Q05996 745 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 PAK2Q13177 524 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 PAN2Q504Q3 1202 aaKnown RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 SPOUT1Q5T280 376 aaKnown RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 ADHFE1Q8IWW8 467 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 POP1Q99575 1024 aaKnown RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 PLVAPQ9BX97 442 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 FTHL17Q9BXU8 183 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
TDP1-208ENST00000553989 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 JADE2Q9NQC1 790 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 TRPV2Q9Y5S1 764 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
TDP1-208ENST00000553989 DDX39AO00148 427 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 BACH1O14867 736 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 SLC27A2O14975 620 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 DGKIO75912 1065 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 MMP1P03956 469 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 SCG2P13521 617 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
TDP1-208ENST00000553989 LIFRP42702 1097 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 HYAL1Q12794 435 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 MARCH8Q5T0T0 291 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 TMTC3Q6ZXV5 915 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 NPAS4Q8IUM7 802 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 CMTR2Q8IYT2 770 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 FANCBQ8NB91 859 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 TRAPPC12Q8WVT3 735 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 PGBD1Q96JS3 809 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 AGO3Q9H9G7 860 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 KCNH7Q9NS40 1196 aa10.07□□□□□ -0.8
TDP1-208ENST00000553989 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
TDP1-208ENST00000553989 STXBP3O00186 592 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 MBTPS2O43462 519 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 TBX10O75333 385 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 LINC00271P0C7V0 271 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 ZNF76P36508 570 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 STAT5BP51692 787 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 ADCY7P51828 1080 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 ACTR2P61160 394 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 DLX2Q07687 328 aaPredicted RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 SMAD4Q13485 552 aaKnown RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 RNF20Q5VTR2 975 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 CREB3L3Q68CJ9 461 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 WWC2Q6AWC2 1192 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 LINC01599Q8WXQ3 324 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 ZNF689Q96CS4 500 aaPredicted RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 PCYT2Q99447 389 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 MXRA8Q9BRK3 442 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 ANO3Q9BYT9 981 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 TCEAL9Q9UHQ7 104 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 CD207Q9UJ71 328 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 NAP1L2Q9ULW6 460 aaPredicted RBP10.06□□□□□ -0.8
TDP1-208ENST00000553989 PADI3Q9ULW8 664 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 PLAGL2Q9UPG8 496 aa10.06□□□□□ -0.8
TDP1-208ENST00000553989 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 LINC01565O15544 149 aa10.05□□□□□ -0.8
TDP1-208ENST00000553989 PPFIA3O75145 1194 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms