RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DEFB115Q30KQ5 88 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 LRRFIP1Q32MZ4 808 aaKnown RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 CC2D1BQ5T0F9 858 aaKnown RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 ZC3H14Q6PJT7 736 aaKnown RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 TTLL7Q6ZT98 887 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 MCM10Q7L590 875 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 LRP10Q7Z4F1 713 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 FRMD5Q7Z6J6 570 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 MASTLQ96GX5 879 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 DDX21Q9NR30 783 aaKnown RBP eCLIP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 NUP98P52948 1817 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 C9IYK1 514 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SHOXO15266 292 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 ADRB1P08588 477 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 DBHP09172 617 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 IARSP41252 1262 aaKnown RBP4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SLURP1P55000 103 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SUSD4Q5VX71 490 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 HS2ST1Q7LGA3 356 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SLITRK4Q8IW52 837 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 C7orf61Q8IZ16 206 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 CNBD1Q8NA66 436 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 NKD1Q969G9 470 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF428Q96B54 188 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 TRPM7Q96QT4 1865 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 BDH2Q9BUT1 245 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 DSCC1Q9BVC3 393 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SLC12A9Q9BXP2 914 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 DUOX1Q9NRD9 1551 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 SUCOQ9UBS9 1254 aaKnown RBP4.25□□□□□ -1.73
SLIRP-202ENST00000553981 GGT7Q9UJ14 662 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 HACL1Q9UJ83 578 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 HCFC2Q9Y5Z7 792 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 LAMB2P55268 1798 aa4.25□□□□□ -1.73
SLIRP-202ENST00000553981 POLR2AP24928 1970 aaKnown RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 A0A1W2PQ27 194 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 A0A1W2PQ64 194 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 A0A1W2PQC6 194 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 A0A1W2PQD8 194 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 FAM86C2PA6NEL3 165 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 YDJCA8MPS7 323 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 TCERG1O14776 1098 aaKnown RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 PRICKLE3O43900 615 aaPredicted RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 DIAPH1O60610 1272 aaKnown RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 ANXA1P04083 346 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 GSTM1P09488 218 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 ACRP10323 421 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 NPR1P16066 1061 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 PFKLP17858 780 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 PRKAR2BP31323 418 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 KCNC1P48547 511 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 EFEMP1Q12805 493 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 CRY2Q49AN0 593 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 CCDC93Q567U6 631 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 HLA-DQA1Q5Y7H0 255 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 INTS3Q68E01 1043 aaKnown RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 CCDC144CPQ8IYA2 1237 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 NAT16Q8N8M0 369 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 CAPNS2Q96L46 248 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 THUMPD2Q9BTF0 503 aaKnown RBP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 NT5C1AQ9BXI3 368 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
SLIRP-202ENST00000553981 DLG5Q8TDM6 1919 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 KDM3BQ7LBC6 1761 aa4.24□□□□□ -1.73
SLIRP-202ENST00000553981 ASTN2O75129 1339 aaPredicted RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 RIC1Q4ADV7 1423 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 A0A087WZG4 1122 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 CCDC85CA6NKD9 419 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 H0Y8X5 98 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 FGF10O15520 208 aaPredicted RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 SRGAP3O43295 1099 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 NTSR2O95665 410 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 STARD3NLO95772 234 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 CYBBP04839 570 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 ERCC3P19447 782 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 GPTP24298 496 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 PLP2Q04941 152 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 CXCL9Q07325 125 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 RTP5Q14D33 572 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 SPATS1Q496A3 300 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 VWA3BQ502W6 1294 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 TDRD10Q5VZ19 366 aaKnown RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 CWF19L1Q69YN2 538 aaKnown RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 PAQR3Q6TCH7 311 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 SAPCD2Q86UD0 394 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 NBPF5PQ86XG9 351 aaPredicted RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 JAMLQ86YT9 394 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF34Q8IZ26 560 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 NGEFQ8N5V2 710 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 FNIP1Q8TF40 1166 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 DHRS1Q96LJ7 313 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 SRRTQ9BXP5 876 aaKnown RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
SLIRP-202ENST00000553981 KNSTRNQ9Y448 316 aa4.23□□□□□ -1.73
SLIRP-202ENST00000553981 LAMB4A4D0S4 1761 aa4.22□□□□□ -1.73
SLIRP-202ENST00000553981 SCN9AQ15858 1988 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms